Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02173 ATGTTCCCCGCCACCTACATTCTTTTAATGTGCCTTCTAAGTTCCTTCTCACCCACAATCAACGCTCTTCTTAACCTCACTTTACCCCACCAACGCCCTCACCTCGAATCCGTCGTCCACGATCTCCAACGGAAGGTGAATGCCTCACTATGGAGAAGGGAAATGTTGTCAACCCCGTTCCTGACACCCTCTGCCATTTTCCAGGGTCTCTCCACTATGACGGGCAGGGAAATTTTTCATAAGATGAAGGAAAAAGTTTTGGGCTCATCTGATCCTGATTCTGGTAAAGGAAAGAGCAAGATGAAGAAGAACATAACTCATGGCTTTCACTTGGTAAAGGGGAGATCAGGTCATGCCATGGAAGACTATCTTGTTGCTCAATTCAAGCAAGTTGACGACAATGAATTGGGTTTATTTGCAATATTTGATGGCCACTCAGGTCACAGTGTACCTGATTACTTGAAGTCTCATTTGTTTGATAATATCTTGAAAGAGCCTAACTTCTGGACAGAACCTGCTGAGGCTGTTAAGAGAGCATATGGTATAACTGATTCTACTATTTTAGACAAATCAGGTGAATTGGGTAGAGGGGGTTCAACTGCGGTTACTGCAATATTGATCAACTGTCAGGAGCTGCTAGTGGCCAATATTGGGGATTCCCGGGCTGTCTTATGCAAGAATGGCGTGGCCAAACAACTATCAGTGGATCATGAACCAAGCATAGAAAGTGAAGATATAAGAAACAGAGGTGGTTTTGTGTCAAACTTCCCAGGGGATGTTCCACGTGTCGATGGTCAGTTGGCGGTGTCAAGGGCATTTGGTGACAAAAGCCTGAAGATACATTTGAGCTCAGAACCATATGTAACTTTGGAGATGATAGAAGATGATGCAGAGTTTCTTATACTAGCCAGTGATGGGTTATGGAAGGTAATGTCAAATCAAGAAGCAGTTAGTGCTATCAAAGATGTTAAGGATGCCAGGTCCGCAGCTAAGGTGCTTACCGAAGAAGCAAAGATCAGGAAAAGTTCTGATGATATCTCTTGCGTTGTTGTGAAATTTCAGTGA 1065 0.4376 MFPATYILLMCLLSSFSPTINALLNLTLPHQRPHLESVVHDLQRKVNASLWRREMLSTPFLTPSAIFQGLSTMTGREIFHKMKEKVLGSSDPDSGKGKSKMKKNITHGFHLVKGRSGHAMEDYLVAQFKQVDDNELGLFAIFDGHSGHSVPDYLKSHLFDNILKEPNFWTEPAEAVKRAYGITDSTILDKSGELGRGGSTAVTAILINCQELLVANIGDSRAVLCKNGVAKQLSVDHEPSIESEDIRNRGGFVSNFPGDVPRVDGQLAVSRAFGDKSLKIHLSSEPYVTLEMIEDDAEFLILASDGLWKVMSNQEAVSAIKDVKDARSAAKVLTEEAKIRKSSDDISCVVVKFQ 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02173 354 Pfam Protein phosphatase 2C 118 346 IPR001932 -
Gma06g02173 354 SUPERFAMILY PP2C-like 101 353 IPR036457 -
Gma06g02173 354 PANTHER PROTEIN PHOSPHATASE 2C 39-RELATED 73 354 - -
Gma06g02173 354 CDD PP2Cc 107 353 IPR001932 -
Gma06g02173 354 ProSiteProfiles PPM-type phosphatase domain profile. 106 353 IPR001932 -
Gma06g02173 354 PANTHER PROTEIN PHOSPHATASE 2C 73 354 IPR015655 GO:0004722|GO:0006470
Gma06g02173 354 Gene3D - 100 354 IPR036457 -
Gma06g02173 354 SMART PP2C_4 96 351 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02173 Gma-Chr6 39281201 39290085 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02173 73 354 PP2C-type Phosphatase Gene Family AT3G15260 77.163 4.51e-165 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02173 K17506 - gmx:100789914 541.191