Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02171 ATGGCTGACATAGCAGGCCTGGCTGAGGCTGCAGGGGCAAGATTTAGTTCACTGGAGCTCATTGGACAGGGATCATTTGGCGATGTGTACAAAGGGTTTGACAGGGAGCTCAACAAAGAAGTTGCTATCAAAGTGATTGATTTGGAAGAATCAGAGGATGAAATTGAGGACATTCAGAAGGAAATTTCTGTTCTGTCTCAATGTCGATCTCCATACATTACTGAGTATTATGGTTCCTTTCTTAATCAAACTAAACTTTGGATAATAATGGAATACATGGCTGGAGGTTCTGTTGCTGATCTACTCCAATCAGGTCCTCCACTTGATGAAATGTCAATTGCTTGCATTCTACGTGATTTGCTTCATGCAATTGATTACCTACATAATGAAGGAAAAATTCATAGAGACATTAAAGCTGCAAACATTTTATTGACTGATAATGGTGATGTAAAGGTTGCAGATTTTGGTGTTTCTGCACAGTTAACAAGAACTATATCAAGGAGAAAGACCTTTGTAGGAACACCATTTTGGATGGCTCCTGAGGTTATTCAAAACTCAGAAGGATATAATGTGAAGGCAGATATATGGTCTCTGGGCATTACTGCAATAGAGATGGCAAAAGGGGAGCCTCCACTTGCTGATCTTCATCCAATGAGAGTGCTTTTCATCATACCCCGAGAGAATCCACCACAACTAGATGAACACTTTTCTCGCTATATGAAAGAATTTGTTTCATTGTGCTTGAAGAAGGTTCCTGCCGAGGCAAGTAGGCCAAGTGCTAAGGAGCTTCTTAGACATCGTTTCATTCGGAATGCTAGGAAGAGTCCAAAGCTATTAGAGAGAATAAGGGAGCGTCCAAAGTACCAAATAAAGGAAGATCAGATGACACCTAGAAATGCCCCAAGGGGGATGGGGGAGGCATCTGATACTATTAAGGTTGCCAAAGATTTAAGGGGTGACGAAACTAATCAGCCTAGTGGCCAAGGTAAATCCCTGAGAAGTTCTGGATGGGACTTCAGCATTGGTGGATCTCAAGGTACTGGAACCTTTCGTAGTGTCTCACGGCCACCACAGTTTAGAGATAAGAAAATTGAACTTTCAAATCATCAGCTTAACCAAAGAAAAAGTCCAGAGAGTGGCTATCAAGTGGGATCTGACAATAAAAGTGCACATAATGAGTCGCTAGAAACTTATTTTGGAAAAGATCTTGGAGTTGCCTACCATGATGAACATCCTGATAATCACCTTGAAGATCAGGATGAATTTTCTGGGAATGGATCAGGAACTGTTGTTATTCGGTCTCCAAAAGGACCCCAGCCATCACTGTTTCGTGACCAAAGTTCCCGGTCTAGCAGCAGCTATGCTTCTTTTGAAGATGTTTCTACCAGTGGAACTGTTGTTTTGCGTAGCCAGTACAATGATTCTGATTCTCCACAGACACCAAGGTCCCGACTGGGACTTAATAGCAGAAATTCAAATGCCTCACTGGAAGATAGTGCTACAAATCTTGCTGAGGCTAAGGTTGCTATCCAAGGTGGATTAAGGAAAGTGAATATCCGAGAGAGATTTGCATTGGGAAAACTCAACAATGATGTACAGGATAGCAGGAGAGGTCAAATATCAAGCAGCTCTGATTCTTCCAGACCATCTCGTGAATACTTTGATGCACAAAAGGGATTTTCAAGATCACACTATGCTATTGATGATGAAGAAAGTGCCAAAATAATCTCATCCTCTGCGCCGCTATCCGTTTTGCTTATTCCTTCATTAAAAGAGGCCATTGCTGATGATCCAGACGGGTCAATAGTGCAAATTGTTATCGATGCTCTTGTAAACATGGAGAGTACAAAGCCCCAATCCTGTGATGTTCTTGTCAAAAAGTTGCTTCAGCAGTTGGCAAGTTCAAAGGAATCTTCATTGAAGGACCTGCAAGAACTGGCTGGCCAAATATTCAGCAAGACCAAATCAGCTGAAGAAAACCGAAATGCAGAGTCTGATAACAAGAAGAAACAAAACAAGGAAGTTCATTCAAATAGCAATTTAAGCCCTCTTGCAAGATTTCTTCTCTCAAGATGGCAAGGCCAAACCTCGCGGGATCTAAATCCAGCTTGA 2112 0.4181 MADIAGLAEAAGARFSSLELIGQGSFGDVYKGFDRELNKEVAIKVIDLEESEDEIEDIQKEISVLSQCRSPYITEYYGSFLNQTKLWIIMEYMAGGSVADLLQSGPPLDEMSIACILRDLLHAIDYLHNEGKIHRDIKAANILLTDNGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNSEGYNVKADIWSLGITAIEMAKGEPPLADLHPMRVLFIIPRENPPQLDEHFSRYMKEFVSLCLKKVPAEASRPSAKELLRHRFIRNARKSPKLLERIRERPKYQIKEDQMTPRNAPRGMGEASDTIKVAKDLRGDETNQPSGQGKSLRSSGWDFSIGGSQGTGTFRSVSRPPQFRDKKIELSNHQLNQRKSPESGYQVGSDNKSAHNESLETYFGKDLGVAYHDEHPDNHLEDQDEFSGNGSGTVVIRSPKGPQPSLFRDQSSRSSSSYASFEDVSTSGTVVLRSQYNDSDSPQTPRSRLGLNSRNSNASLEDSATNLAEAKVAIQGGLRKVNIRERFALGKLNNDVQDSRRGQISSSSDSSRPSREYFDAQKGFSRSHYAIDDEESAKIISSSAPLSVLLIPSLKEAIADDPDGSIVQIVIDALVNMESTKPQSCDVLVKKLLQQLASSKESSLKDLQELAGQIFSKTKSAEENRNAESDNKKKQNKEVHSNSNLSPLARFLLSRWQGQTSRDLNPA 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02171 703 Gene3D Transferase(Phosphotransferase) domain 1 12 302 - -
Gma06g02171 703 SMART serkin_6 15 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g02171 703 MobiDBLite consensus disorder prediction 370 390 - -
Gma06g02171 703 MobiDBLite consensus disorder prediction 406 456 - -
Gma06g02171 703 CDD STKc_MST3_like 14 289 - -
Gma06g02171 703 SUPERFAMILY Protein kinase-like (PK-like) 14 308 IPR011009 -
Gma06g02171 703 MobiDBLite consensus disorder prediction 318 390 - -
Gma06g02171 703 MobiDBLite consensus disorder prediction 469 498 - -
Gma06g02171 703 MobiDBLite consensus disorder prediction 654 682 - -
Gma06g02171 703 MobiDBLite consensus disorder prediction 657 675 - -
Gma06g02171 703 Pfam Protein kinase domain 16 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g02171 703 MobiDBLite consensus disorder prediction 321 354 - -
Gma06g02171 703 MobiDBLite consensus disorder prediction 421 456 - -
Gma06g02171 703 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Gma06g02171 703 Coils Coil 653 674 - -
Gma06g02171 703 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 1 701 - -
Gma06g02171 703 MobiDBLite consensus disorder prediction 406 420 - -
Gma06g02171 703 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 701 - -
Gma06g02171 703 ProSiteProfiles Protein kinase domain profile. 15 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g02171 703 Coils Coil 41 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02171 Gma-Chr6 39198349 39213388 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02171 1 700 MAP Kinase Kinase Kinase Kinase AT3G15220 64.438 0.0 848
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Gma06g02171 Pkinase 7e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02171 K08838 - gmx:100786501 1263.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g02171 06 39198349 39213388 Gma06g02171 06 39198349 39213388 ECH