Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02149 ATGGGTCGTCCACCCAGTAATGGGGGCCCAGCCTTTCGCTTCACCCAGCCTGAGGTATCAGAAATGGAAGCTATTCTTCAAGAACATAACAATGCTATGCCGTCACGTGATGTTCTTACAGCTCTTGCAGAGAAATTCAGTGAATCACAAGATCGTAAAGGCAAGATTTCAGTGCAGATGAAGCAAGTTTGGAATTGGTTTCAAAATAAGCGATATGCGATAAGAGCAAAATCAAGTAAGACTCCTGGGAAGTTAAATATTACACCCATGCCTCGGGATGATTACAATTCAACCCCAATAAGGAGTATGCCTCAACAACCAACAGCTGCTTCAATTCCTGCTGCTTCTGCTACAGTTCCAACAGCAGTAAAGGCAACTACAGAAAATTCAGTTATGGAATTTGAAGCTAAATCTGGAAGGGATGGAGCATGGTATGATGTGGCTACCTTTCTATCACACAGATATTTGGAAACCAGTGATCCGGAAGTGCTGGTACGATTTGCTGGTTTTGGACCTGAGGAAGATGAGTGGATTAACATTCGAAAGCATGTTAGGCCACGCTCATTGCCTTGTGAATCATCAGAATGTGTTGTAGTCATCCCTGGTGATCTCATACTTTGTTTTCAGGAAGGTAAGGAGCAAGCCCTATACTTTGATGCCCATGTCCTTGATGCTCAAAGGAGAAGGCATGATGTACGAGGCTGTCGCTGTAGATTTCTAGTTCGTTATGATCATGATCAGTCAGAGGAAATTGTGCCGCTTAGGAAGATTTGTCGCCGGCCCGAAACCGATTATCGGTTACAGCAACTTCATGCTGTGAATGAGGCAGCACCTGTGGATCAGCAGAAGACTGGCATGGATCCAGCAGCAAATGTTAATGCCGTGAGGGCTACTACTACTGAAACAGTGCCAAAGCAGCTGATTGCAGCAAACATTCATATGGAGACGACGCCAGTTCCAGTTGTGCAAACAAATGTTCCTCAACAACCTCCACAAAGTATGGATATGGATGTGGATCAAAAGAAAGCTGAAACAATTGCTGATGTTCAAGCTGGAAATTCCATCATCACCCCAGGCAGTGTTGTTACTAACATCATTACTACAAGCAGTGTTCCTGAAGTCTTTAGTCAGACTCAGAACATGGTTGAATAA 1152 0.441 MGRPPSNGGPAFRFTQPEVSEMEAILQEHNNAMPSRDVLTALAEKFSESQDRKGKISVQMKQVWNWFQNKRYAIRAKSSKTPGKLNITPMPRDDYNSTPIRSMPQQPTAASIPAASATVPTAVKATTENSVMEFEAKSGRDGAWYDVATFLSHRYLETSDPEVLVRFAGFGPEEDEWINIRKHVRPRSLPCESSECVVVIPGDLILCFQEGKEQALYFDAHVLDAQRRRHDVRGCRCRFLVRYDHDQSEEIVPLRKICRRPETDYRLQQLHAVNEAAPVDQQKTGMDPAANVNAVRATTTETVPKQLIAANIHMETTPVPVVQTNVPQQPPQSMDMDVDQKKAETIADVQAGNSIITPGSVVTNIITTSSVPEVFSQTQNMVE 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02149 383 Gene3D - 10 84 - -
Gma06g02149 383 CDD homeodomain 13 75 IPR001356 GO:0003677
Gma06g02149 383 Gene3D - 129 190 - -
Gma06g02149 383 Gene3D - 191 263 - -
Gma06g02149 383 Pfam SAWADEE domain 132 258 IPR032001 GO:0003682
Gma06g02149 383 SUPERFAMILY Homeodomain-like 4 76 IPR009057 -
Gma06g02149 383 SMART HOX_1 7 81 IPR001356 GO:0003677
Gma06g02149 383 ProSiteProfiles 'Homeobox' domain profile. 13 77 IPR001356 GO:0003677
Gma06g02149 383 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 1 351 - -
Gma06g02149 383 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 1 351 IPR039276 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02149 Gma-Chr6 38423459 38434915 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Gma06g02149 SAWADEE 6.6e-40 CL0049
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02149 - - gmx:100783895 719.924