Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02137 ATGAGTCAACAAGTCTATTTTCACTCCGAAAGTATCCATTTCAGTGGCACCAACATTTGTCTAGCTTCAGGAAATGGAATTAGTCTAGATTGCCATTATGTACTAGATGTTCATGACAGCCATTTGGATCAGCACTTACAACCATATGTACAAGCTTTCAGCGCTAATAGAAGTTCATCAGAGAATGCGAGAATTGGTCACTCCTTCAACATTCATCCTCCTGTAACTGCACCTTCGTATAGACTTCCAACAAATCCTTCACACGGTTCTTCAATCCTCATACATGATGCTTTTGAGATGGGTGCCAGGCATCCTGGCTTTGCACCATTTGCAGGTGCACGCATACACCAGTCTCATAGAGGCAACTTGCACGAGATGATAACTCTTATACATCAAAATCTTCCTTCTGCGGTCTTTTTCTCAGATGATGATGTTGCTTTACTGGTTGACCATCATACTGATATGCACTTGGACACTGAAGATATGTCTTATGAGGCAAGTATACCATCCATAGACCTTCTTGAATTAGGTGAGCAGATTGGCAATGCAAAATCGGGTTTACCAGAGAAAACAATTACAAGTCAAATGAAGACCAAAACTTATATACTACCTACTAATGCTACTAACTTGGAGGAGGCAGCTTCTGAGGAACAGGAAACTGATCTTTGCATAATATGCCAGGATGAATATAAGAACAAAGAGAATATTGGAATTCTTAGATGCGGGCATGAATATCACGCAGATTGTTTAAGGAGATGGTTACTTGAGAAAAATGTCTGCCCCATGTGCAAATCAATAGCATTGACTCCTGGAGGAAAACAATGA 825 0.4036 MSQQVYFHSESIHFSGTNICLASGNGISLDCHYVLDVHDSHLDQHLQPYVQAFSANRSSSENARIGHSFNIHPPVTAPSYRLPTNPSHGSSILIHDAFEMGARHPGFAPFAGARIHQSHRGNLHEMITLIHQNLPSAVFFSDDDVALLVDHHTDMHLDTEDMSYEASIPSIDLLELGEQIGNAKSGLPEKTITSQMKTKTYILPTNATNLEEAASEEQETDLCIICQDEYKNKENIGILRCGHEYHADCLRRWLLEKNVCPMCKSIALTPGGKQ 274
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02137 274 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 184 267 IPR013083 -
Gma06g02137 274 ProSiteProfiles Zinc finger RING-type profile. 223 264 IPR001841 -
Gma06g02137 274 Pfam Ring finger domain 222 264 IPR001841 -
Gma06g02137 274 PANTHER OS04G0185500 PROTEIN 38 269 - -
Gma06g02137 274 SUPERFAMILY RING/U-box 217 269 - -
Gma06g02137 274 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 38 269 IPR045191 GO:0061630
Gma06g02137 274 SMART ring_2 223 263 IPR001841 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gma06g02137 Gma-Chr6 37934390 37937212 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02137 150 268 C3H Transcription Factor Family AT2G15530 40.336 2.83e-26 105
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02137 K19041 - gmx:100780488 421.779