Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02134 ATGCATGTAATTATACATGGGAACATTGCAGCTAATGAGAGTTCAGATGATAAGGGCATAATAGGAGCTATTTTAGATAAGAGTTCTCGCATTGGCCAAGAGCATGCAGTGGCTATGAAGCTGGCATTGGAAGATTTTTATCAAAAAAGCATTCAGAGTTTTTCTCTGCATATAAGAAACTCTCAAGGGGATCCTCTTTTGGCAGCTATTGCAGCTAAAGATCTCATTGATAATCAAAAGGTGCAAGCCATCATTGGACCACAGACATGGGCAGAGACATCTTTAGTGGCTGAAATCAGTAGCCAAAAGAGGATACCTTTCCTTTCTCTAGCAGAAGCAACTCCAGAATGGGCAATGAAGAAGTGGCATTTCCTGCTGCAATCCTCACCTAGCCAAATAATGCAGATGAAAGCTATTGCTGAAATTGTAAAGTCTTGGAAACTCTATAATATTACTATGATATATGAAGATGGAGACTCATCATCCACTAAAATTTTATCTCAACTCTCTGAAGCTCTTACAGAATTTGGGACAGAATTAAGCAATGCTATAGCAATCCCACCTCTAGTTTCTTCTTCATTGTCCCAACAACTTGAGAAACTAAGAGAAGGACAATGTAGAGTCATTATTGTCCATTTATCCTTTCCTTTGGCACTAAACCTCTTTGAAACTGCAAAAAGAATGAATATTATGGGGGAAGGTAATGTATGGATTACTACTGGTTCCTTTACAAGCCTTGTTCATTCCTTGAATGCATCCACTATCTCCAATATGCAAGGGGTTATTGGAGTCAAGAGCTATATCCCAAAACTATTTCCCCAGTATGCTGACTTCTACCGTAGATTTCGGAAAAAATTTAGCTCGGAGAATTTTGAAGAGTTTAATTATGAGCCTGGGATCTTTGCAGCCGAAGCTTATGATGCTGCAAGGATTGTGGTTGATGCAATGAGGGAAACCAACCAAATAGGGGGTCAACTTTTGCTAGATAAGATTATGCTTAGTAATTTTACTGGCTTAAGTGGAAAAATTCAGTTTACTAAACATGGAAGAGCTCCGGCACATACTTTTAAAATCATTAATTTGATAGGGAGGAGCTACAGGGAAATTGGTTTCTGGTCAGATGGACTTGGTTTCTCAAAATATTTAGATGAAAAGGCTTCTTATAGTTCTTCGGTGAAGGAATTAGGAAAAGTTGTTAATCCAACATGTGCCATACGACTGAGAATTGGTGTCCCTTCCATGTCAAACGTCAAACAGTATGCCGAAGTTATTCAAGATCTTTCTCAAAATGTTCCTTCCTTCAACTTCAAGGGATTTTCCATATGTCTTTTTGATGAAATAGTAAAAAAATTGCCATACCGTCTGGAATATGATTATTTTGCCTTTAATGGTACATATGATGAGCTGGTGAAGCAAGTTTATTTGAAGAACTATGATGCAGTTGTTGGTGATGTATCGATAGTGTCCACACGTTATGAATATGCTTCATTCACTCAGCCCTATACTGAAACCGGACTGATGATGATTGTTCCTATTAAATCAAAGACAGGTGATAGAACGTGGCTATTCATGAAACCTTTCACAAAGCGCATGTGGATTCTAATATTGTTCATCATTGTCTACAATGGTTTTGTTGTATGGATTATTGAAAGAAACCACCGCCCTGAACCGGAGGGGCCTATTCTGCAGCAAACCACAACTATGTTATTGTTGGCTTTCTGTTCTTTGTTCTCTTTGAATGGGGACAGATTGCATAGCAATTTATCAAGGGTGGCAATGGTTGTATGGTTTTTGGTGGCTCTAATCATTTCACAGATTTACACTGCTAGCCTTGCCAGCATGTTGACTGTTGAACGGTCTGAACCAACTGTAGACAGCATTCAGCAGCTAAAGAACAACAATGCCATTGTAGGATGTGATAGAGGATCCTACTTGCAAAGATATCTGCAGGATGCATTGGGCATCAATGCCAATAAAATCAAGCCATTTAACTCTATGGAGAGCCTTGCCTATGCGCTAAGAAACAAAGAAATAGCAGCTGTCTTCCTTGATGTTCCGCAGGCAAAAATTTTCCTTGCAAAGCACTGCAAAGGGTTTGTTCAAGCAATGCCTACATACAAAATTGGAGGATATGGATTTGTATTGCTTCAGCATTTCTTTCACTTTTTTCCTATATTAGTTTGA 2184 0.3874 MHVIIHGNIAANESSDDKGIIGAILDKSSRIGQEHAVAMKLALEDFYQKSIQSFSLHIRNSQGDPLLAAIAAKDLIDNQKVQAIIGPQTWAETSLVAEISSQKRIPFLSLAEATPEWAMKKWHFLLQSSPSQIMQMKAIAEIVKSWKLYNITMIYEDGDSSSTKILSQLSEALTEFGTELSNAIAIPPLVSSSLSQQLEKLREGQCRVIIVHLSFPLALNLFETAKRMNIMGEGNVWITTGSFTSLVHSLNASTISNMQGVIGVKSYIPKLFPQYADFYRRFRKKFSSENFEEFNYEPGIFAAEAYDAARIVVDAMRETNQIGGQLLLDKIMLSNFTGLSGKIQFTKHGRAPAHTFKIINLIGRSYREIGFWSDGLGFSKYLDEKASYSSSVKELGKVVNPTCAIRLRIGVPSMSNVKQYAEVIQDLSQNVPSFNFKGFSICLFDEIVKKLPYRLEYDYFAFNGTYDELVKQVYLKNYDAVVGDVSIVSTRYEYASFTQPYTETGLMMIVPIKSKTGDRTWLFMKPFTKRMWILILFIIVYNGFVVWIIERNHRPEPEGPILQQTTTMLLLAFCSLFSLNGDRLHSNLSRVAMVVWFLVALIISQIYTASLASMLTVERSEPTVDSIQQLKNNNAIVGCDRGSYLQRYLQDALGINANKIKPFNSMESLAYALRNKEIAAVFLDVPQAKIFLAKHCKGFVQAMPTYKIGGYGFVLLQHFFHFFPILV 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02134 727 CDD GluR_Plant 406 714 - -
Gma06g02134 727 Pfam Bacterial extracellular solute-binding proteins, family 3 435 706 IPR001638 -
Gma06g02134 727 PANTHER GLUTAMATE RECEPTOR 14 714 - -
Gma06g02134 727 CDD PBP1_GABAb_receptor_plant 21 382 IPR044440 -
Gma06g02134 727 SMART GluR_14 406 718 IPR001320 GO:0015276|GO:0016020
Gma06g02134 727 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 14 714 - -
Gma06g02134 727 Gene3D - 27 353 - -
Gma06g02134 727 Gene3D - 521 650 - -
Gma06g02134 727 SUPERFAMILY Periplasmic binding protein-like II 433 715 - -
Gma06g02134 727 SUPERFAMILY Periplasmic binding protein-like I 15 374 IPR028082 -
Gma06g02134 727 Gene3D - 131 373 - -
Gma06g02134 727 Pfam Ligand-gated ion channel 529 643 IPR001320 GO:0015276|GO:0016020
Gma06g02134 727 Gene3D - 404 520 - -
Gma06g02134 727 Pfam Receptor family ligand binding region 37 362 IPR001828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02134 Gma-Chr6 37833243 37836538 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02134 3 715 Ion Channels AT2G29120 30.789 2.89e-109 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02134 - - gmx:100820229 1385.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g02134 06 37833243 37836538 Gma06g02134 06 37833243 37836538 ECH