Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02133 ATGAAAGCTATTGCTGAAATTGTGAAGTCTTGGAAACTCTATAATATTACCATGATATGTGAAGATGGAGACTCATCATCTATTGAAGTTTTGTCTCAGCTCTCTGGAGCTCTTAAAGAAGTTGGGACAGAATTAAGCAATGTTATAGCAATTCTGCCTCTAGTTTCTTCTTCGTTGTCTCAACAACTTGAGAAGCTAAGAGAAGGACAATGCAGAGTCCTTATTGTCCATTTGTCCTTTCCTTTGGCACTACACCTGTTTGAAACTGCAAAAAGAATGGATATGATGGGGGAAGGTAATGTATGGATTACTACTGGTACCTTTACAAGCCTTGTTTATTCCTTGAATGCATCCACTATCTCCAATATGCAAGGGATTATTGGAGTCAAGAGCTATATCCAAAGTCTCTGGTACCAAAATGCAAACTTCTACCATAGATTTCGGAAAAATTTTAGCTCAGAGAATTTTGAAGAGTTTAATTATGAGCCTGGGATCTTTGCAGCCCAGGCTTATGATGTTGCATGGATTGTTGTTGATGCAATGAGGAAAACCAACCAAAAAGGGGGTCAACTTTTGCTAGATAAGATATTACTTAGTAATTTTACTGGCTTAAGTGGAACAATTCAGTTCACTGACAATAAATTAACTCCAGCACATACTTTTCAAATAATTAATGTGATAGGGAGGAGCTACAGGGAAATTGGGTTCTGGTCAGATGGACTTGGTTTCTCAAAATCTTTGGAACAAaNNNNNNNNNNaAGTATCGTATCCAACACTTGTGCCTCCAAGGACCTGGAATATGATGCAGTTGTTGGTGATGTCGCAATAGTGTCCACGCGTTATGAATATGTTTCATTCACTCAGCCCTATACTGATCCAGGAGTGGTGATGATTGTTCCTGTTAAATCAAAAACAGGCAACAGAGCATGGCTATTTTTGAAGCCTTTCACGAAGCTCATGTGGGTTCTAATATTGGTCATCATTGTCTACAATGGTTTTGTTGTATGGTTGATTGAAAGAAACCACTGCGCTGAACTTAAGGGCCCTATTCTGCACCAAACCACAACTATGTTGTGGTTGGCTTTCTGTTCTTTGTTCTCTGTGAATGGGGACAGATTACATAGCAATTTATCAAGGGTGGCAACGGTGGTCTGGCTTTTTGTGGCTCTAATCATTACACAGACTTACACTGCTAGCCTTGCCAGCATGTTGACTGTTGAACAGTTTGAACCAACTGTAGACAGCATTCAGCAGCTAAAGAACAGCAATGCCATGGTAGGATATGATAGAGGATCCTACTTGAAAATATATCTCCAGGATGTATTGGGCATCAAAGCTGAAAACATAAAACAATTTGACTCACAGAAGAGCTATGCTGATGCCCTAAGAAACAAAGAAATAGCAGCTGCCTTCCTTGATATCCCTGAGGCCAAAATTTTCCTTGCAAAGAACTGTAAAGGGTTTGTTCAAGCAGGACCTACATTCAAAATTGGAGGATATGGATTTaaccatgtttatgcttactcagttgcaatatctttgcaggtatttccaaagggttctccgttgcttcatagtgtaaaccaagccctactgaacatatctgaaaatggcacactacgtaatctagaaaacaatatgcttgcatcagaggaatgtgaagacataactgacccaaatgtagaaactactagtcttagcccagcaagcttcatggtactcttcatCTTAACTGGAGGCACTTCAACAATTGTTCTATTAATTTACATATTCTCTGTAAATCATATATACCCTGGACAGAGAACAATGTGGAGTCTAATGATGGCTGTGATTCAAAGTTGGAGATCTCAAAAGAGACTGTTTTCAAGAAGAGTTCACAATGTTGCAGAAAATAATGAGAGTTCAGATGTTAAGGGCATAATAGGAGCTATTTTAGATAGCAGTTCTCGCATTGGCCAAGAGCATGCAGTGGCTATAAATCTGGCATTGGAGGACTTTCATCAAAAAAACAATCTGAGTTTTGCTCTGCATGTAAGAAACTCTCAAGGAGATCCTCTTTTGGCAGCTACCGCAGCTAGAGATCTCATCGATAATCAAAAGGTGCAAGCCATCATTGGACCACAAACATGGGCAGAGACATCTTTAGTTGCTGAAGTTTGTACCCAAAAGAGCATACCTttcctttctctagcggatgcaactccagaatgggcaatgaagaagtggcccttcctgctgcaatcCTCTCCTAGGCAAATTATGCAGATGAAAGCTATTGCTGAAATTGTAAAGTCTTGGAAACTCTATAATGTCAGCATGATATATGAAGATGGAGACTCGTCATCCACTGAAGTTTTATCTCGGCTCTCTGAAGCTCTTACATCAGTTGGCACAGAATTAAGCAATGTTCTAACAGTTCCACCTCTAGTTTCTTCTTCATTGTCTCAACAACTTGAGAAGCTAAGAGAAGGACAATGCAGAGTCCTTATTGTCCATTTGTCCTTTCCTTTGGCACTACACCTGTTTGAAACTGCAAAAAGAATGGATATGATGGGGGAAGGTAATGTATGGATTACTACTGGTACCTTTACAAGCCTTGTTCATTCCTTGAATGCATCCACTATCTCCAATATGCAAGGGGTTATTGGAGTCAAGAGCTATATCCCAAAACTATGGCACCAGTATGGAAACTTCTACCATAGATTTCGGAAAAAATTTAGCTCGGAGAATTTTGAAGAGTTTAATTATGAGCCTGGAATCTTTGCCACCGAAGCTTATGATGCTGCAACGATTGTGGTTGATTCAATGAGGAAAACCAACAAAAAAGGGGGTCAATTTTTGCTGGATAAGATTTTACGTAGTAATTTTACTGGCTTAAGTGGACAAATTCAGTTCAATGGACATGAAAGAGCTCCAAAACATACTTTTCAAATCATTAATGTGATTGGGAGTAGCTACAGGGAAATTGGGTTCTGGTCAGATGGACTTGGTTTCTCAAAATCTTTGGATCCTAATGCTTCTTACAGTTCTTCAGTGAAGGAATTAGGAAAGGTAGTTAATCCAACATGTGACATACGACTAAGGATTGGTGTCCCCTCCATGTCAATCTTCAAACAGTATGCCAATGTTATTCAAGATCACTCAGAAAATGTTACTTCCTTCAAGGGATTTGCCATAGATCTTTTCTATGAAACAGTAAAAAAATTGCCATACCATCTGGAATATGATTATTTTGCGTTTAATGGCACATATGATGAGCTGGTGAAGCAAGTTTATCTGAAGAACTATGATGCAGTTGTTGGTGATGTAACAATAGTGTCCACGCGTTATGAATATGCATCATTCACTCAACCCTTTACTGATACGGGACTGGTGATGGTTGTTCCTGTAAAATCAAAAACAGGTGGTAGAACGTGGCTATTCATGAAGCCTTTCACAAAGCTCATGTGGATTCTAATATTGGTCATCATTTTCTACAATGGCTTTGTTGTATGGATGATTGAAAGAAACCACTGCCCTGAACTGAAGGGCCCTATTCTGCATCAAACCACAACTATGCTGTGGTTGGCTTTCTGTTCTCTGTTCTCTTTGAATGGGGACAGGTTGCATAGCAATTTATCAAGGGTGGCAATGGTAGTATGGTTTTTTGTGGCTCTAATCATTACGCAGATTTACACTGCTAGCCTTGCCAGCATGTTGATTGTTGAACAGTTTGAACCAACTGTAGACAGCATTCAGCAGCTAAAGAACAACAATGCCATTGTAGGATGTGATAGAGGATCCTACTTGCAAAGATATCTGCAGGATGCATTGGGCATCAATGCTGAAAACATCAAGCAGTTTGACTCACAAGAGAGCCATGCTAATGCCCTAAGAAACAAAAAAATAGCAGCTGTCTTCCTTGATGTTCCTGGGGCCAAAATTTTCCTTGCAAAGTACTGTAAAGGGTTTGTTCAAGCAGGGCCTATATACAAACTTGGAGGATATGGATTTGTATTGCTTCAAAAATTTCTCTTATTTCCTGTATTCATTTCTGAGTAA 4041 0.3643 MKAIAEIVKSWKLYNITMICEDGDSSSIEVLSQLSGALKEVGTELSNVIAILPLVSSSLSQQLEKLREGQCRVLIVHLSFPLALHLFETAKRMDMMGEGNVWITTGTFTSLVYSLNASTISNMQGIIGVKSYIQSLWYQNANFYHRFRKNFSSENFEEFNYEPGIFAAQAYDVAWIVVDAMRKTNQKGGQLLLDKILLSNFTGLSGTIQFTDNKLTPAHTFQIINVIGRSYREIGFWSDGLGFSKSLEQXXXXSIVSNTCASKDLEYDAVVGDVAIVSTRYEYVSFTQPYTDPGVVMIVPVKSKTGNRAWLFLKPFTKLMWVLILVIIVYNGFVVWLIERNHCAELKGPILHQTTTMLWLAFCSLFSVNGDRLHSNLSRVATVVWLFVALIITQTYTASLASMLTVEQFEPTVDSIQQLKNSNAMVGYDRGSYLKIYLQDVLGIKAENIKQFDSQKSYADALRNKEIAAAFLDIPEAKIFLAKNCKGFVQAGPTFKIGGYGFNHVYAYSVAISLQVFPKGSPLLHSVNQALLNISENGTLRNLENNMLASEECEDITDPNVETTSLSPASFMVLFILTGGTSTIVLLIYIFSVNHIYPGQRTMWSLMMAVIQSWRSQKRLFSRRVHNVAENNESSDVKGIIGAILDSSSRIGQEHAVAINLALEDFHQKNNLSFALHVRNSQGDPLLAATAARDLIDNQKVQAIIGPQTWAETSLVAEVCTQKSIPFLSLADATPEWAMKKWPFLLQSSPRQIMQMKAIAEIVKSWKLYNVSMIYEDGDSSSTEVLSRLSEALTSVGTELSNVLTVPPLVSSSLSQQLEKLREGQCRVLIVHLSFPLALHLFETAKRMDMMGEGNVWITTGTFTSLVHSLNASTISNMQGVIGVKSYIPKLWHQYGNFYHRFRKKFSSENFEEFNYEPGIFATEAYDAATIVVDSMRKTNKKGGQFLLDKILRSNFTGLSGQIQFNGHERAPKHTFQIINVIGSSYREIGFWSDGLGFSKSLDPNASYSSSVKELGKVVNPTCDIRLRIGVPSMSIFKQYANVIQDHSENVTSFKGFAIDLFYETVKKLPYHLEYDYFAFNGTYDELVKQVYLKNYDAVVGDVTIVSTRYEYASFTQPFTDTGLVMVVPVKSKTGGRTWLFMKPFTKLMWILILVIIFYNGFVVWMIERNHCPELKGPILHQTTTMLWLAFCSLFSLNGDRLHSNLSRVAMVVWFFVALIITQIYTASLASMLIVEQFEPTVDSIQQLKNNNAIVGCDRGSYLQRYLQDALGINAENIKQFDSQESHANALRNKKIAAVFLDVPGAKIFLAKYCKGFVQAGPIYKLGGYGFVLLQKFLLFPVFISE 1346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02133 1346 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 637 1335 - -
Gma06g02133 1346 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 1 251 - -
Gma06g02133 1346 Pfam Ligand-gated ion channel 546 580 IPR001320 GO:0015276|GO:0016020
Gma06g02133 1346 Gene3D - 1139 1268 - -
Gma06g02133 1346 Gene3D - 304 434 - -
Gma06g02133 1346 CDD PBP1_GABAb_receptor_plant 641 1002 IPR044440 -
Gma06g02133 1346 Pfam Ligand-gated ion channel 1149 1301 IPR001320 GO:0015276|GO:0016020
Gma06g02133 1346 PANTHER GLUTAMATE RECEPTOR 637 1335 - -
Gma06g02133 1346 PANTHER GLUTAMATE RECEPTOR 265 639 - -
Gma06g02133 1346 PANTHER GLUTAMATE RECEPTOR 1 251 - -
Gma06g02133 1346 CDD GluR_Plant 1026 1332 - -
Gma06g02133 1346 SUPERFAMILY Periplasmic binding protein-like I 2 238 IPR028082 -
Gma06g02133 1346 Gene3D - 643 972 - -
Gma06g02133 1346 Pfam Bacterial extracellular solute-binding proteins, family 3 1053 1332 IPR001638 -
Gma06g02133 1346 Gene3D - 1 160 - -
Gma06g02133 1346 SUPERFAMILY Periplasmic binding protein-like I 640 994 IPR028082 -
Gma06g02133 1346 SMART GluR_14 1028 1341 IPR001320 GO:0015276|GO:0016020
Gma06g02133 1346 SUPERFAMILY Periplasmic binding protein-like II 266 545 - -
Gma06g02133 1346 SUPERFAMILY Periplasmic binding protein-like II 1053 1333 - -
Gma06g02133 1346 Gene3D - 751 993 - -
Gma06g02133 1346 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 265 639 - -
Gma06g02133 1346 Gene3D - 1023 1138 - -
Gma06g02133 1346 Pfam Receptor family ligand binding region 657 983 IPR001828 -
Gma06g02133 1346 Pfam Receptor family ligand binding region 1 227 IPR001828 -
Gma06g02133 1346 Pfam Bacterial extracellular solute-binding proteins, family 3 266 545 IPR001638 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02133 Gma-Chr6 37796383 37808731 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02133 118 604 Ion Channels AT2G29120 29.225 5.00e-55 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02133 - - gmx:100776939 1363.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g02133 06 37796383 37808731 Gma06g02133 06 37796383 37808731 ECH