Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02103 ATGACTAGTTGCTTTCATCTTTTCAGAAAGAAAGGATCTTCCTCAGGCACACAGTTGACCGGAGTTGATTTAGATGTTTCAGAAATTCAGAATGTCAACATCTACACTTACAGAGAATTGCGAATTGCCACTGAAGGTTTTAGCAATGCAAACAAGATAGGGCAGGGAGGTTTTGGAGTAGTCTATAAGGGAAAGCTGAGAAACGGTTCTTTGGCAGCTATAAAGGTTTTATCGGCTGAATCAAGACAAGGGGTCCGGGAGTTCTTGACAGAAATCAAGGTGATCTCTAGTATAGAGCATGAGAATCTAGTCAAGTTACATGGATGTTGTGTGGAAGACAACCACAGAATTTTGGTATATGGCTATCTTGAGAATAACAGCCTAGCACAAACACTTATTGGTTCAGGCCATAGCAGCATCCAATTAAGTTGGCCTGTAAGGAGGAACATTTGCATAGGTGTTGCTCGGGGCCTTGCATTCCTTCATGAGGAGGTTCGGCCACACATTATCCATAGAGACATAAAAGCAAGCAATGTACTACTTGATAAAGACCTCCAGCCCAAAATTTCAGATTTTGGCCTTGCAAAGCTTATTCCACCAAACCTGACCCATATTAGTACTCGTGTTGCTGGAACAGTTGGGTATCTAGCACCTGAATATGCAATCCGAAATCAAGTGACTAGAAAATCAGATGTCTATAGTTTTGGAGTTCTACTATTAGAGATTGTTAGTAGGAGGCCTAACACAAACAGACGTTTGCCTGTTGAAGAACAGTATCTTCTCACAAGGGCTTGGGATTTGTATGAGAGTGGGGAGGCAGAAAAATTGGTGGATGCTTTTCTAGAAGGAGACTTCAATATTGAGGAGGCAGTCAGATTTTGTAAGATTGGTCTCCTTTGCACGCAGGATTCTCCGCAGCTCCGGCCCTCTATGTCCAGTGTGCTTGAGATGCTTTTAGGTGAAAAAGACGTGAATGAGGAGAATGTGACAAAACCGGGCATGATATTTGAATTTGTGGAAGCCAAAAGTGCAGGTAAACAAAAATGCAAAGCTGAAGTGGATAGTAAATCTTTGTTGGCTGAAGGGAAGCAAGATGATTCATCTTCATCAGGAACCATGAGCTCTTTTGCTACCATGACCTTCACAGCAATTTATGATAGAAGCGATTAG 1170 0.4205 MTSCFHLFRKKGSSSGTQLTGVDLDVSEIQNVNIYTYRELRIATEGFSNANKIGQGGFGVVYKGKLRNGSLAAIKVLSAESRQGVREFLTEIKVISSIEHENLVKLHGCCVEDNHRILVYGYLENNSLAQTLIGSGHSSIQLSWPVRRNICIGVARGLAFLHEEVRPHIIHRDIKASNVLLDKDLQPKISDFGLAKLIPPNLTHISTRVAGTVGYLAPEYAIRNQVTRKSDVYSFGVLLLEIVSRRPNTNRRLPVEEQYLLTRAWDLYESGEAEKLVDAFLEGDFNIEEAVRFCKIGLLCTQDSPQLRPSMSSVLEMLLGEKDVNEENVTKPGMIFEFVEAKSAGKQKCKAEVDSKSLLAEGKQDDSSSSGTMSSFATMTFTAIYDRSD 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02103 389 ProSiteProfiles Protein kinase domain profile. 47 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g02103 389 SUPERFAMILY Protein kinase-like (PK-like) 27 318 IPR011009 -
Gma06g02103 389 PANTHER RECEPTOR-LIKE KINASE 1 375 - -
Gma06g02103 389 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
Gma06g02103 389 CDD STKc_IRAK 53 318 - -
Gma06g02103 389 Pfam Protein kinase domain 48 250 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g02103 389 Gene3D Phosphorylase Kinase; domain 1 21 122 - -
Gma06g02103 389 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 375 - -
Gma06g02103 389 ProSitePatterns Protein kinases ATP-binding region signature. 53 75 IPR017441 GO:0005524
Gma06g02103 389 SMART serkin_6 47 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g02103 389 Gene3D Transferase(Phosphotransferase) domain 1 123 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02103 Gma-Chr6 36234797 36238101 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02103 35 364 Receptor kinase-like Gene Family AT1G56120 51.497 2.33e-105 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma06g02103 Pkinase 2.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02103 - - gmx:100801735 756.133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g02103 06 36234797 36238101 Gma06g02103 06 36234797 36238101 ECH