Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02077 ATGAAGAACAGTAAGGTGTTTTCTTTTGATGTTGTGGATTATGATGGTGGAGAAATTGGGGCAACTTGCTTCAATGCTGTGGCTGATCAGTTCTACAATGTTATTCAAGCTGGTAAGGTATATCTAATTTCCAGGGGAAGCATAAAGCCAGCTCAGAAGAATTTTAATCACCTTCGCAATGATCAAGAGCTGACCCTTGATGTGGCATCAATTATACAACCATTCCTTGATGATAATGACTTAATTACATCACAGACATTTAATTATCACCCCATTAGTGAAATTGAAAGTTTGGAAAACAACAGCATTGTGGATGTGATTGGTGTGGTGACTTCTATTAGGCCTACAACATCAATCATGAGAAAAAATGGCACTGAAGTTCAGAAGAGAACTCTCCAGTTGAAAGACATGTCTGGTCGAAGTGTTGAGTTAACTCTATGGGGAAATTTTTGCATTGTAGAAGGACAAAGGTTGCAAACTATTTGTCATGCTAGGGAATTTCCAGTTTTGGCTACAAAAGCTGTCAGATTAAATGATTTCAATGGGAAGTCTGTCGAGACTATAGCCACTAGTCAGCTATATGTGGAGGTTGATTTTACTGTCAATGCAGATACATGA 618 0.3819 MKNSKVFSFDVVDYDGGEIGATCFNAVADQFYNVIQAGKVYLISRGSIKPAQKNFNHLRNDQELTLDVASIIQPFLDDNDLITSQTFNYHPISEIESLENNSIVDVIGVVTSIRPTTSIMRKNGTEVQKRTLQLKDMSGRSVELTLWGNFCIVEGQRLQTICHAREFPVLATKAVRLNDFNGKSVETIATSQLYVEVDFTVNADT 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02077 205 Gene3D - 1 77 IPR012340 -
Gma06g02077 205 SUPERFAMILY Nucleic acid-binding proteins 87 199 IPR012340 -
Gma06g02077 205 Pfam Replication protein A OB domain 92 195 IPR031657 -
Gma06g02077 205 PANTHER REPLICATION FACTOR A 1, RFA1 4 199 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Gma06g02077 205 SUPERFAMILY Nucleic acid-binding proteins 3 80 IPR012340 -
Gma06g02077 205 CDD RPA1_DBD_B 103 199 - -
Gma06g02077 205 CDD RPA1_DBD_A 4 74 - -
Gma06g02077 205 PANTHER REPLICATION PROTEIN A SUBUNIT 4 199 - -
Gma06g02077 205 Gene3D - 82 203 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02077 Gma-Chr6 34653883 34655143 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02077 4 199 Core DNA Replication Machinery Family AT4G19130 61.735 1.65e-83 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02077 K07466 - gmx:100778597 351.288