Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02070 ATGGTCAAGAGGACAAATAATGCAAATGTCGAGGACTCTTACTCTACGAAAAGATTCAGGACCCATTTGCTTTTCCAACATCTGAAGAACTGCCCCTGGAAAAAGGGGGACAAGTACAGGAAAGGAAAATACTTACAGATTTCTGAATATTTTGAAAACAAGGAGAGTTCGGAGGGAGAGGACACCATTACTATTGCTGCTAATTTTGGCTGGTATAAACCACTTGTTGATATCATGATTCAAGGACCAGATTCAAGAATAGCAAGGACAAAAGCCATAGTTAATTTGGAGTTGAAGGATCCAAACTTAAAACTTCTTAGCAAGGAAGGCACTATACCTCCTTTGCTAGAAATGTTGACAGGCAATATTGAATCAAAAGACTTGTCGTTGTCAGCCTTAGTTAAATTAGCAGGATCTCACGCCAATAAGGGAATTACTGTTGCATCTGGATGA 453 0.3929 MVKRTNNANVEDSYSTKRFRTHLLFQHLKNCPWKKGDKYRKGKYLQISEYFENKESSEGEDTITIAANFGWYKPLVDIMIQGPDSRIARTKAIVNLELKDPNLKLLSKEGTIPPLLEMLTGNIESKDLSLSALVKLAGSHANKGITVASG 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02070 150 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 55 150 - -
Gma06g02070 150 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 55 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02070 Gma-Chr6 34564958 34565499 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02070 12 143 U-box Gene Family AT5G42340 29.630 3.50e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02070 - - gmx:100783638 161.384