Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02056 ATGAGCCCTCCAAGAACAGAAGCTGGTTTGGATAGAATAGCTTGGAAAGGAACTGTTGATGGTTCCTTTAATTTGAAGTCAGCTTATGGTGTTTGTGATCTGCAAGTGACTTTTGATATTAACTTATTTAAGTTGCTGCATAGATGGCCAGAGGGTCATATTAACCCAGCAGTGACATTTGGGTTGTTCTTGCCATGCAAGCTCTCTCTGACAAGGGCAATTTTTTACATAATCATGCAGTGCTTCGGAGCTATATGTGGTGCTGGTGTAGTTAAGGGGTTCGAGCCACACCTCTATGAGAACCCTGCTCTAACTTGCAAATGA 324 0.4259 MSPPRTEAGLDRIAWKGTVDGSFNLKSAYGVCDLQVTFDINLFKLLHRWPEGHINPAVTFGLFLPCKLSLTRAIFYIIMQCFGAICGAGVVKGFEPHLYENPALTCK 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02056 107 Pfam Major intrinsic protein 52 103 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma06g02056 107 Gene3D Glycerol uptake facilitator protein. 36 106 IPR023271 -
Gma06g02056 107 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 51 97 IPR034294 -
Gma06g02056 107 PRINTS Major intrinsic protein family signature 72 91 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma06g02056 107 PRINTS Major intrinsic protein family signature 35 59 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma06g02056 107 ProSitePatterns MIP family signature. 53 61 IPR022357 -
Gma06g02056 107 SUPERFAMILY Aquaporin-like 46 99 IPR023271 -
Gma06g02056 107 PANTHER AQUAPORIN PIP1-3 51 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02056 Gma-Chr6 32952716 32953845 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02056 24 101 Major Intrinsic Protein MIP AT4G23400 56.790 6.87e-24 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02056 K09872 - gmx:100803259 98.9821