Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02053 GGAAATTTATCAGATGGGACATAATAGCAGTCAAGCAGCTTTCTTCAAAATCAAGGCAAGGGAACCTCGAGTTTCTAATCGAGTTAGGCATGATTTCAGCTTTGCAACACCCTTGTCTTGTTAAACTCTATGGCTGTTGTGTCGAGGGAGATCAGTTGTTGTTGGTATACGAATATATGGAAAACAATAGCCTTGCTCGTGCTTTGTTTGGTCCAGCAGAATACCACATAAAATTGGATTGGCCAACAAGGCAAAAGATATGTGTTGGTATTGCTAGAGCCAAGCTAGATGAAGAGGACAATACCCACATAAGCACCCGAATTGCTGGAACTTATGGATACATGGCTCCTGAGTATGCTATGCATGGATATTTGACAGACAAAGCAGACGTTTATAGCTTCGGAGTTGTTGCCTTGGAAATTGTTAGTGGGCGGAGCAATATGATTCAACCGCAGAAAGAAGAAGCATTCCATCTTCTTGATTGCGCACATATGTTGAAAGGGAAAGGTAATCTGATGGAGCTAGTTGATAGAAGATTGGGTTTGGACTTCTACAAAAACGAGGTTACAGCGAAGATCAACGTGTCTCTTTTATGCACCAATGTCACTCCCTCCCTCAGGCCAACAATGTCCTTAGTGGTAAGCATGCTTGAAGGTAGATCTGTGGTTCAGGAGGTGTTTTCGGAGTCAAGTGAGGCATTGGATGAGAAGAAGTTGGAGGCGATGCAACAGCGTTACCAAGAGATAATAGAAGAAAATAAGTTAACTGAGATTCAAAATCTGAGTCTCTCAATGGATGACACATTGGCTGCTTCATCATCTGCAACAGATCTCTATCCTGTAAACATGAATTCTTCCTACTGGCAGAAAAGGGGATGGCGGTGA 884 0.4265 KFIRWDIIAVKQLSSKSRQGNLEFLIELGMISALQHPCLVKLYGCCVEGDQLLLVYEYMENNSLARALFGPAEYHIKLDWPTRQKICVGIARAKLDEEDNTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGVVALEIVSGRSNMIQPQKEEAFHLLDCAHMLKGKGNLMELVDRRLGLDFYKNEVTAKINVSLLCTNVTPSLRPTMSLVVSMLEGRSVVQEVFSESSEALDEKKLEAMQQRYQEIIEENKLTEIQNLSLSMDDTLAASSSATDLYPVNMNSSYWQKRGWR 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02053 293 Coils Coil 238 258 - -
Gma06g02053 293 Pfam Protein tyrosine and serine/threonine kinase 8 91 IPR001245 GO:0004672|GO:0006468
Gma06g02053 293 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 93 252 - -
Gma06g02053 293 ProSiteProfiles Protein kinase domain profile. 1 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g02053 293 Gene3D Transferase(Phosphotransferase) domain 1 3 93 - -
Gma06g02053 293 SUPERFAMILY Protein kinase-like (PK-like) 7 219 IPR011009 -
Gma06g02053 293 Gene3D Transferase(Phosphotransferase) domain 1 94 246 - -
Gma06g02053 293 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 5 92 - -
Gma06g02053 293 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 5 92 - -
Gma06g02053 293 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 93 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02053 Gma-Chr6 32883752 32885497 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02053 1 272 Receptor kinase-like Gene Family AT1G53420 52.077 2.09e-97 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma06g02053 PK_Tyr_Ser-Thr 2e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02053 - - gmx:100785451 389.423