Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02045 ATGGAAGCAAGTACTGGACTTTTTGCTGGTACCCCAAACAGCAATGAGCTTGTGGTCATTCAAGGACATGATGAGCCTAAGCCTGTGAAGAACTTAGATGGTCAACTCTGTGAGATATGTGGTGATTCTGTGGGACTTACGGTGGATGGAGACTTATTTGTAGCTTGTGAAGAGTGTGGTTTCCCTGTGTGCAGGCCATGTTATGAGTATGAAAGAAGGGAAGGGACTCAAGTTTGTCCTCAGTGTCATACAAGATACAAGCGAACCAAAGGAAGCCCAAGAGTTTTGGGAGATGAGGATGAAGATGACGTGGATGATATTGAACATGAATTCAAGCATGAAGAGATGCTACAGGGGAACAAGACCCATAGAGATAGTGATGTGGGTTTAGCAAAGGTAACATTTCTTCTTGAAGCAGGTGCAAAGTTGGATGACAAGGAGAAAGTAGATGAGTGGATGTTGCACCAAGGCAATCTATGGCCTGAAACTGATGCGTCAGATGATCCCGTAAAGGCCATGAAAGAGCCACTGTCAAGGAAAGTACCAATACCATCAGGCAGACTCAGTCCTTACAGAATGATGGTTGTGGCTAGGCTCCTCCTTCTATTACTGTTCTTTCAGTACAGAATCTTTCACCCAGTACCTGATGCAATTGGACTATGGTTCATATCTGTGACATGTGAAATCTGGCTTGCATTATCCTGGATGATTGATCAGCTTCCCAAATGGTTCCCCATTGATCGTGAGACATATCTTGACCGTCTTTCAATCAGGTTTGAACCAGAGAACAAGCCCAATATGCTTTCTCCAATAGATATCATTGTCACTACTGTGGATCCAATCAAGGAACCTCCTTTAGTAACAGCCAACACTGTTCTTTCAATCTTGGCCCTGGATTACCCTGCTGACAAAATCTCATGCTACGTTTCTGATGATGGAGCTTCCATGCTCACCTTTGAAGTTCTTCAAGAAACTGCTGAGTTTTCCAGAAAGTGGGTACCTTTCTGCAAAAAATTTTCTGTAGAACCTAGAGCACCAGAAAAGTACTTGACTGAGAAGATAGATTTTCTAAAGGATAAGCTTCAATCCACTTATGTGAAAGAACGCCGCACTATGAAGAGAGAATATGAGGAATTTAAGGTGAGGATAAATGCACTTGTGGCTAAATCCATGAGAGTTCCCCCAGAAGGGTGGACTATGAAAGATGAGACACCATGGCCAGGAAACAACTCCAAAGACCATCCAAGTATGATACAAGTCCTTCTTCCTCACAATGTAGGTAATGAACTTCCTTGTCTTGTCTACACATCTCGTGAGAAAAGGCCTGCATTCCAACACCACAACAAAGCTGGCGCAATCAATGCCATGCTTCGTGTATCCGCTGTGTTAAACAATGCTCCTTTTGTGCTCAACTTGGATTGCAATCATTATGTAAATAACAGCAAAGTCGTGCGAGAGGCCATGTGTTTCTTCATGGACATACAACTTGGGAATGGCATTGGCTTTGTACAGTTTCCACTAAGATTTGACAGCCTCGATAGGAATGATCGTTATGCTAACAAAAACACTGTTTTATTTGATATTAACTTGAGGTGCCTAGATGGAATTCAGGGACCTGCTTATGTTGGTTCAGCATGTATCTTCAGAAGGAAAGCCTTAACTGGCTTTGATTCTCCAAAGGCTTCAAAACGCCCAAGCATGGTGCAAGTACACTCAAAACAGGACGAGAATGGAGAAGAAGCAAGCAAAACAGCAGCAACAGATGAGGACAAGGAGCTATTGAAGTCCGAGAATAAATTTGGGATGTCCACAATTTTCATGAATTCTTCATGGACAGAAGAAGGTGGTGTTGATCCTTCTTCCAGTCAGGAAGCCCTTCTTAAAGAAGCCATTCATGTCATGAACTCCAGATATGAAGACAGAACTCTCTGGGGATATGAGGTGGGTTTGAGCTATGGATCCATAGCAACAGATACTCTGACAAGTATGAAGATGCATTGTGGTGGTTGGAGGTCTGTATATTGCATGCCAAAGAGAGATCCATTCAGGGGTACAGCTCCTATCAACCTTACAGAAAGACTCAACCAGGTGCTGAGATGGGCAGTGGGATCACTTCAGATCCTATTCAGCAGCCATTGCCCACTTGTGTATGGCCTCAATGGAGGAAGACTCAAGGGACTCCAACGAATTGCCTATATTAACAGCACTGTCTACCCCTTCACCTCAATACCCCTCCTAATTTATTGTACCATTCCTGCCATCTGCTTGCTCACTGATAAGTTCATTACACCATCGGTAGGCACTTTTGCAAGCCTGATCTTCATTGCATTGTTCATCTCAATCTTTGCCTCGGCGATTCTTGAATTGAGATGGAGTAGAGTTAGCCTTGAGGAATGGTGGAGAAGCCAGCAATTCTGGGTCATTGGAAGTGTGTCTGCAAACCTCTTTGCCGTTTTGCAAGGCATTATGGGAGCCCTGCCACTTTCTAGTAGAGTCAACAAAAACTTCAGCATTGTATCAAAGGCACCAGATGAGGTAGAGTTTCGTGAACTCTATGCCATTAGATGGACTGCACTTCTAATACCTCCAACCACAATCATAATAATCAATCTCATTGGTATTGTGGCTGGCTTCACCGATGCCATAAACAGTGGTGAACATTCTTGGGGAGCTTTGCTTGGGAAACTGTTCTTTTCTTTATGGGTTATTGTCCATTTGTACCCTTTCCTTAAAGGTCTAATGGGTAGGCAGAACAGAACACCAACTCTTATTGTCATATGGTCTGTGCTCTTGGCTTCTATCTTTTCCTTGGTTTGGGTCAGAGTTGACCCTTTTGTGTTGAAAACAAAGGGGCCTGATGTCAAGCAATGTGGAATCAGCTGCTGA 2886 0.4349 MEASTGLFAGTPNSNELVVIQGHDEPKPVKNLDGQLCEICGDSVGLTVDGDLFVACEECGFPVCRPCYEYERREGTQVCPQCHTRYKRTKGSPRVLGDEDEDDVDDIEHEFKHEEMLQGNKTHRDSDVGLAKVTFLLEAGAKLDDKEKVDEWMLHQGNLWPETDASDDPVKAMKEPLSRKVPIPSGRLSPYRMMVVARLLLLLLFFQYRIFHPVPDAIGLWFISVTCEIWLALSWMIDQLPKWFPIDRETYLDRLSIRFEPENKPNMLSPIDIIVTTVDPIKEPPLVTANTVLSILALDYPADKISCYVSDDGASMLTFEVLQETAEFSRKWVPFCKKFSVEPRAPEKYLTEKIDFLKDKLQSTYVKERRTMKREYEEFKVRINALVAKSMRVPPEGWTMKDETPWPGNNSKDHPSMIQVLLPHNVGNELPCLVYTSREKRPAFQHHNKAGAINAMLRVSAVLNNAPFVLNLDCNHYVNNSKVVREAMCFFMDIQLGNGIGFVQFPLRFDSLDRNDRYANKNTVLFDINLRCLDGIQGPAYVGSACIFRRKALTGFDSPKASKRPSMVQVHSKQDENGEEASKTAATDEDKELLKSENKFGMSTIFMNSSWTEEGGVDPSSSQEALLKEAIHVMNSRYEDRTLWGYEVGLSYGSIATDTLTSMKMHCGGWRSVYCMPKRDPFRGTAPINLTERLNQVLRWAVGSLQILFSSHCPLVYGLNGGRLKGLQRIAYINSTVYPFTSIPLLIYCTIPAICLLTDKFITPSVGTFASLIFIALFISIFASAILELRWSRVSLEEWWRSQQFWVIGSVSANLFAVLQGIMGALPLSSRVNKNFSIVSKAPDEVEFRELYAIRWTALLIPPTTIIIINLIGIVAGFTDAINSGEHSWGALLGKLFFSLWVIVHLYPFLKGLMGRQNRTPTLIVIWSVLLASIFSLVWVRVDPFVLKTKGPDVKQCGISC 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02045 961 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 20 110 IPR013083 -
Gma06g02045 961 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 260 368 IPR029044 -
Gma06g02045 961 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 413 558 IPR029044 -
Gma06g02045 961 SUPERFAMILY RING/U-box 21 107 - -
Gma06g02045 961 Coils Coil 369 389 - -
Gma06g02045 961 Pfam Cellulose synthase 271 955 IPR005150 GO:0016020|GO:0016760|GO:0030244
Gma06g02045 961 CDD mRING-HC-C4C4_CesA_plant 35 85 - -
Gma06g02045 961 MobiDBLite consensus disorder prediction 559 593 - -
Gma06g02045 961 SUPERFAMILY Nucleotide-diphospho-sugar transferases 271 778 IPR029044 -
Gma06g02045 961 MobiDBLite consensus disorder prediction 569 593 - -
Gma06g02045 961 PANTHER CELLULOSE SYNTHASE 1 961 - -
Gma06g02045 961 Pfam Zinc-binding RING-finger 27 104 IPR027934 -
Gma06g02045 961 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 1 961 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02045 Gma-Chr6 31000569 31005692 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02045 1 961 Cell Wall Biosynthesis AT5G17420 62.888 0.0 1316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02045 K10999 - gmx:100807219 1880.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g02045 06 31000569 31005692 Gma17g01129 17 9745594 9749082 PCT