Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02023 ATGGATCGCTTTCATGAAAATGAAAATGGCATACTTGTTGCTACAGATGTTGCTGCAAGGGGTCTTGATATTCTTGGTGTTAGAATTGTTGTCCACTATCAGCTTCCACATTCAGCAGAGGGTTATGTTCATAGAAGTGGAAGAACAACCAGAGCTTTTGCTGAAGGTTGTAGTATTGCTTTAATATCATCAAGAGATACATCAAAGTTTGTTTCATTGTGCAAGTCATTTTCCAAGGATAAGAAAAATTGGTTTGATCGGAATGCTAGCTCACTGGAATTAGTTACAGAAAATTATGACAGTGAAGAGGCACAAGTGAACAAACATAAGCAAATGAAGACCATCTCTAGACAATTGAAGAAATTGCAAAAGGAGCTCGAAATGTTGATTTTACATCCATTACAATCAAAAACATTTTTGCATCGATATTTAGCAGGGGCATTATCCTTATTAT 454 0.359 MDRFHENENGILVATDVAARGLDILGVRIVVHYQLPHSAEGYVHRSGRTTRAFAEGCSIALISSRDTSKFVSLCKSFSKDKKNWFDRNASSLELVTENYDSEEAQVNKHKQMKTISRQLKKLQKELEMLILHPLQSKTFLHRYLAGALSLL 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02023 151 CDD SF2_C_DEAD 1 62 - -
Gma06g02023 151 Pfam Helicase conserved C-terminal domain 1 52 IPR001650 -
Gma06g02023 151 Gene3D - 1 139 IPR027417 -
Gma06g02023 151 PANTHER RNA HELICASE 1 147 - -
Gma06g02023 151 Coils Coil 92 132 - -
Gma06g02023 151 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1 100 IPR001650 -
Gma06g02023 151 PANTHER ATP-DEPENDENT RNA HELICASE DDX24 1 147 - -
Gma06g02023 151 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 89 IPR027417 -
Gma06g02023 151 SMART helicmild6 1 53 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02023 Gma-Chr6 29219185 29220171 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02023 4 72 Eukaryotic Initiation Factors Gene Family AT5G11170 42.029 1.04e-12 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02023 K14805 - gmx:100806018 221.861