Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02008 ATGTCTGCAGGTTCCGTAGCTGCAATTGTGGCTGGTGTAGTAGTTTTTCTTGTGCTGGTATATGGTATACTTTGGAGGAGATGCTGCCTAGAACAGAAAAGTTCTCTAGCAAAAGGTCCAGAAGAATACCAAATAAAATTGGATTGGCCAACAAGGCAAAAGATATGTGTTGGTATTGCTAGAGGTTTGACATACCTTCATGAGGAATCGAGATTGAAAATTGTCCATAGGGACATCAAGGCCATTAATGTGTTGCTTGATAAAAATCTAAACCCAAAGATATCTGATTTTGGTTTAGCCAAGCTAGATGAAGAGGACAATACCGGCATAAGCACCCGAATTGCTGGAATTTATGGATACACAGCTCCTGAGTATGCTATGCATGGATATTTGACTGACAAAGCAGATGTTTATAGCTTTGGAGTTGTTGCCTTGGAAATTGTTAGTGAGCGGAGCAATATGATTCAACGGCAGAAAGAAGAAGCATTCCTTCTTCTTGATTGGGTTACAGCGATGATCAACGTCGCTCTTTTATGCACCAATGACACTGCCTCCCTCAGGCCAACAATGTCCTCAGTGGTAAGCATGCTTGAAGGTAGATCTGTGGTTCAGGAGGTGTTTTCAGAGTCAAGTGAGGCATTGGATGAGAAGAAGTTGGAGGCAATGTGA 669 0.4215 MSAGSVAAIVAGVVVFLVLVYGILWRRCCLEQKSSLAKGPEEYQIKLDWPTRQKICVGIARGLTYLHEESRLKIVHRDIKAINVLLDKNLNPKISDFGLAKLDEEDNTGISTRIAGIYGYTAPEYAMHGYLTDKADVYSFGVVALEIVSERSNMIQRQKEEAFLLLDWVTAMINVALLCTNDTASLRPTMSSVVSMLEGRSVVQEVFSESSEALDEKKLEAM 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02008 222 Gene3D Transferase(Phosphotransferase) domain 1 32 218 - -
Gma06g02008 222 ProSiteProfiles Protein kinase domain profile. 1 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g02008 222 ProSitePatterns Serine/Threonine protein kinases active-site signature. 74 86 IPR008271 GO:0004672|GO:0006468
Gma06g02008 222 SMART serkin_6 16 197 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g02008 222 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 39 208 - -
Gma06g02008 222 Pfam Protein tyrosine and serine/threonine kinase 45 163 IPR001245 GO:0004672|GO:0006468
Gma06g02008 222 SUPERFAMILY Protein kinase-like (PK-like) 35 202 IPR011009 -
Gma06g02008 222 PANTHER BNAC01G36570D PROTEIN 39 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02008 Gma-Chr6 28052360 28055102 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02008 17 222 Receptor kinase-like Gene Family AT1G53420 55.061 1.42e-80 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma06g02008 PK_Tyr_Ser-Thr 3.4e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02008 - - cam:101501658 284.263