Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02007 ATGGCTGCGTGGAAGAAGTTGGCAATTTTAGGGAAGGGTTCTTATGGTACGGTTTATCTTGCTACTGTTGCTCTTCCCCAAGAATGCAATGAGAAGGTTGTAGCAGTCAAGAGTTCGAGCCCTTTCTCTTTCTCAATTGCTTCAATGCAGAAGGAAAAAAGAATACTGGACTCATTCTTGGGTTGCAAGGAAATCCTTCAATGCTATTTTGACCAATTCACTGTCGAGAGAAATTATGTGACATACAATCTTTTCATGGAGTGTGCTCCTTATGGTTCTCttcttggtttagtaaacaagaaggggccaatatcggatagtgaagtaagagtctacactcgtatgcttctcaaagggctttcttGCATTCATCGAAAAGGAGTCGTCCATTGTGATCTGAAACCGGACAACATCCTTCTCTTTCCTTCATCTGATGATCATGCAAGGTATCAACTGAAGATTGCTGATTTTGGGTTGTCCAAGACTAGAGAAGATGCAAATGCTGAGTATGGGAAGGTCAAGTTTAGAGGGACACCTTCTTACATGTCGCCAGAATCGGTCGTTGGTCAGATTGAACCAGCGTTAGATATATGGTCTCTTGGGTGCATTATAATCGAGATGATCACTGGATTCCGTGCATGGAAGAACCTGCGAACTAAAAAGGAGATAATGTTAAAGCTTTTTGTCCTTCAAGAAGCACCTGAAATACCCAATGGACTGAGTTGGGATTGCAAGAATTTCTTGAGCAAGTGTTTTGTGAAGGATCCTAGGCAGAGATGGACTGCTACAATGCTTCTCAACCATCCTTTCCTTTATCCAACATGTTACAT 830 0.3783 MAAWKKLAILGKGSYGTVYLATVALPQECNEKVVAVKSSSPFSFSIASMQKEKRILDSFLGCKEILQCYFDQFTVERNYVTYNLFMECAPYGSLLGLVNKKGPISDSEVRVYTRMLLKGLSCIHRKGVVHCDLKPDNILLFPSSDDHARYQLKIADFGLSKTREDANAEYGKVKFRGTPSYMSPESVVGQIEPALDIWSLGCIIIEMITGFRAWKNLRTKKEIMLKLFVLQEAPEIPNGLSWDCKNFLSKCFVKDPRQRWTATMLLNHPFLYPTCY 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02007 276 CDD STKc_MAPKKK 4 271 - -
Gma06g02007 276 SUPERFAMILY Protein kinase-like (PK-like) 4 273 IPR011009 -
Gma06g02007 276 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 274 - -
Gma06g02007 276 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Gma06g02007 276 Gene3D Transferase(Phosphotransferase) domain 1 1 275 - -
Gma06g02007 276 ProSitePatterns Protein kinases ATP-binding region signature. 10 37 IPR017441 GO:0005524
Gma06g02007 276 Pfam Protein kinase domain 5 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g02007 276 ProSiteProfiles Protein kinase domain profile. 4 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g02007 276 SMART serkin_6 4 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g02007 276 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02007 Gma-Chr6 28050670 28051499 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02007 4 271 MAP Kinase Kinase Kinase AT5G67080 42.960 8.82e-61 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Gma06g02007 Pkinase 4.8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02007 - - gmx:102664043 541.191