Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02001 ATGAAAGAGGATGAAGAGACGCAGCAGAATCAACAACAAATCACTGACTCGTCCCTCTCCACCGAGTCACGCACTTCCACTCCTTCTGATGGAGCGCCACCCAACTCGGAAACCCTAGTTCTCCGCTCCTCGCTTCTGCATGACCTTGCCACTCATATGCAGGGAAGCTCTACCGCACGTAAGGGTGGAAAAGCTGAGAGTAAGGTGTCTGCTCAGCCTCCTGATGAGGAAACTGTTGTAAAAGATGCAGTTGAGGCACCTAAAAAACAGACAGAAAATCGACTTCAGTCTTTTTGTTCAACTTCATTATCTGGAGTATCACCAACTTCTGTTTCACATTCTTTATCATCTGCCCTTAGTCCAACTGTACCACAACAGAGACCGTCTCCTCCTAAGGCTAATAGTGTACAAGTGCCAAAAGTAGACAAAGGAACACCTTCTGATGGTACAACCTTATCTTCTGTTTCTGTTGCAAGGGCATCTGCATCTGATGGATACAACTGGCGGAAGTACGGCCAGAAGCAAGTGAAGAGTCCTATGGGTTCTCGAAGCTATTACAGGTGTACCCATTCATATTGTTGTGCTAAGAAGATTAAATTTTGCGACCATTCAGGACATGTGATAGAGATTGTTTATAAAAGTCAACATAGTCATGATCCCCCGCATAAAATTGATACCGCTAAGGAAAGTAAGCTCCTGCCTTCCAGTGAACCTAAAGTAGAAAGCAGTGTTTCAAAGCACTCTACCAATGTTTTGAATGATTCTGATCCATCATCTTCTCCAAAAGAACTTTTACAAGAAACACCTTGCAGTGGTGATAAGAATCTAGAAAACTCATCTAATGTTGAGAATGGCAAAATTATTTTGAATGATGAACATGTTAATGACCCAGAGCCAAAAAGAAGATTAAACAATAGTGATTTGGATACGGCAGTAAAACCAGGCAAGAAAACAAAGTTTGTTGTACATGCGACAAAGGATGTGGGGATATCAGGTGATGGATACCGGTGGCGCAAGTATGGACAAAAGTTAGTGAAGGGAAATCCACACTTCAGAAACTACTACAGATGCACTACTGCTGGATGTCCTGTCCGAAAGCACATTGAGACTGCTGTGGATAATTCAAAAGCTCTCATCATAACGTACAAGGGAATGCATGATCATGACATGCCTGTGCCCAAGAAACGGCATGGCCCGCCAAGTGCTTCACTTGTGGCTGCGGCAGCACCTGCTTCAACGAACAATGTGCAGTTAAAAAAAACTGGATTGCTACAAAACCAGGAAACTGAAGCTCAATGTTTAGAGGACACAGAAGGAGAGTTAACCGGGGAAGCGTTGGACCTTGGTGGTGAGAAAGCAATTGAGTCGGCTCGAACTCTTTTGAGCATAGGCTTTGAAATTAAACCTTGTTGA 1413 0.436 MKEDEETQQNQQQITDSSLSTESRTSTPSDGAPPNSETLVLRSSLLHDLATHMQGSSTARKGGKAESKVSAQPPDEETVVKDAVEAPKKQTENRLQSFCSTSLSGVSPTSVSHSLSSALSPTVPQQRPSPPKANSVQVPKVDKGTPSDGTTLSSVSVARASASDGYNWRKYGQKQVKSPMGSRSYYRCTHSYCCAKKIKFCDHSGHVIEIVYKSQHSHDPPHKIDTAKESKLLPSSEPKVESSVSKHSTNVLNDSDPSSSPKELLQETPCSGDKNLENSSNVENGKIILNDEHVNDPEPKRRLNNSDLDTAVKPGKKTKFVVHATKDVGISGDGYRWRKYGQKLVKGNPHFRNYYRCTTAGCPVRKHIETAVDNSKALIITYKGMHDHDMPVPKKRHGPPSASLVAAAAPASTNNVQLKKTGLLQNQETEAQCLEDTEGELTGEALDLGGEKAIESARTLLSIGFEIKPC 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02001 470 MobiDBLite consensus disorder prediction 236 286 - -
Gma06g02001 470 MobiDBLite consensus disorder prediction 10 42 - -
Gma06g02001 470 MobiDBLite consensus disorder prediction 49 63 - -
Gma06g02001 470 PANTHER WRKY TRANSCRIPTION FACTOR 32-RELATED 4 468 - -
Gma06g02001 470 ProSiteProfiles WRKY domain profile. 326 391 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma06g02001 470 MobiDBLite consensus disorder prediction 140 154 - -
Gma06g02001 470 MobiDBLite consensus disorder prediction 214 235 - -
Gma06g02001 470 SUPERFAMILY WRKY DNA-binding domain 160 221 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma06g02001 470 ProSiteProfiles WRKY domain profile. 157 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma06g02001 470 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 4 468 IPR044810 GO:0003700
Gma06g02001 470 MobiDBLite consensus disorder prediction 214 311 - -
Gma06g02001 470 MobiDBLite consensus disorder prediction 90 133 - -
Gma06g02001 470 MobiDBLite consensus disorder prediction 289 311 - -
Gma06g02001 470 Gene3D WRKY domain 149 222 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma06g02001 470 Gene3D WRKY domain 315 392 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma06g02001 470 MobiDBLite consensus disorder prediction 1 154 - -
Gma06g02001 470 SMART WRKY_cls 162 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma06g02001 470 SMART WRKY_cls 331 390 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma06g02001 470 Coils Coil 424 444 - -
Gma06g02001 470 Pfam WRKY DNA -binding domain 164 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma06g02001 470 Pfam WRKY DNA -binding domain 333 388 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma06g02001 470 SUPERFAMILY WRKY DNA-binding domain 325 391 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02001 Gma-Chr6 26594873 26601679 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02001 152 470 WRKY Transcription Factor Family AT4G30935 58.154 2.10e-120 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma06g02001 WRKY 2.3e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02001 - - gmx:100800480 888.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g02001 06 26594873 26601679 Gma06g02001 06 26594873 26601679 ECH