Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01994 ATGGGTCATGGACTTCAGAAGGACAAGCAGGAGGGTCTAATAGCTCCTCTGATGGAATGGGAAGTGCAATGGAGAAGCCTGCTTCTCGTTTATGAATTCATGAAAAATGGATACTTGGATAAAAGGATCTTCCCTTCATATCAAGGTCGAGATAGATTGTTAGATTGGACAACACGTTTAAATATAGCCATAACTACTGCACAAGGGATTGCATACTTTCATGAGCATTGTAGGGATTGGATAATACATTGTGACATCAAACTGGAAAATATATTGGTAGACGAAAACTTTTGTCCCAAAGTATTTGATTTTGGGCTGGCCAAATTGATGGGAAGGGAGCACTCTCAGGTGGTGACAATGGTCAGAGGCACTAGAGGTTATTTGGCACCAGAATGGGTTAGTAATCGCCCTATAACTATAAAAGATGACGTTTACAACTTTGGAATGCTTCTTTTAGAGATCATTGGTGGCAAGAGAAATCTTGACATGTCCTTTGGTGCTGAGGACTTTTTCTATCCTGGTTAG 525 0.4057 MGHGLQKDKQEGLIAPLMEWEVQWRSLLLVYEFMKNGYLDKRIFPSYQGRDRLLDWTTRLNIAITTAQGIAYFHEHCRDWIIHCDIKLENILVDENFCPKVFDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITIKDDVYNFGMLLLEIIGGKRNLDMSFGAEDFFYPG 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01994 174 ProSitePatterns Serine/Threonine protein kinases active-site signature. 81 93 IPR008271 GO:0004672|GO:0006468
Gma06g01994 174 ProSiteProfiles Protein kinase domain profile. 1 174 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g01994 174 PANTHER OS07G0415500 PROTEIN 28 174 - -
Gma06g01994 174 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 28 174 - -
Gma06g01994 174 SMART serkin_6 1 171 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g01994 174 Gene3D Transferase(Phosphotransferase) domain 1 12 168 - -
Gma06g01994 174 Pfam Protein kinase domain 17 161 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g01994 174 SUPERFAMILY Protein kinase-like (PK-like) 14 163 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01994 Gma-Chr6 25474450 25475231 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01994 25 162 Receptor kinase-like Gene Family AT5G20050 49.296 1.11e-39 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Gma06g01994 Pkinase 5.5e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01994 - - gmx:100794281 277.33