Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01964 atggaaaataaacatggaGTGTTGTTTTTTGAGTTCAAGGTGAAGTGCCCTGAAGATGTGCTTGTGGCCAAGACATGGAGAACAGGTAATGCTTTCAACTGGGTGTATACTTTTCACTCAATTGATAATAGAAAGAAGAGCAATGCTAATGGGTTGGGATCCCATGATTTTGACAAAGATTCCTCAATAGTAGCACAAATGCTAGTTTCCTGTAATTTATGTTCTGAACTAGATGACAAAGTATTTGACAACTCTATGGTGACAGAATTTGTGTTGTATGATTTTACACACTCAAGCCTCGGGCCAAACCTTCGAACGCCTCACCGTTCAACTCTGCAAAGACCTCAACTTCTCCCCGAAGCTGGACGATGGAACCCGACCCGATTCTCCACCATAATCCCGAACCTTGCCATCAAAACAACCATCCTCCACTGGTGCGATAGTTCCCATACCCAACACCCGCTCCCACTGGATTACGCCTCCCTCGAGCGCCACGTCAGAGAGCAAAAAGATAAGGAACAAGAAAAAGAAAATCTAATTAGGGTTTTGAAAAAGGAGCTTCTCGACGCTATGGCCGACAACCCTCCCGTCATCTTCTCCCACGTCGCCACCGAGTTAGGCCCCCGAGTTAATCACTTCAACTCCGGAGCCCAGAGTCAACAAGGGGTACGGTGA 675 0.4548 MENKHGVLFFEFKVKCPEDVLVAKTWRTGNAFNWVYTFHSIDNRKKSNANGLGSHDFDKDSSIVAQMLVSCNLCSELDDKVFDNSMVTEFVLYDFTHSSLGPNLRTPHRSTLQRPQLLPEAGRWNPTRFSTIIPNLAIKTTILHWCDSSHTQHPLPLDYASLERHVREQKDKEQEKENLIRVLKKELLDAMADNPPVIFSHVATELGPRVNHFNSGAQSQQGVR 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01964 224 Coils Coil 159 186 - -
Gma06g01964 224 PANTHER EXPRESSED PROTEIN 1 98 - -
Gma06g01964 224 PANTHER DOMAIN PROTEIN, PUTATIVE (DUF3527)-RELATED 1 98 - -
Gma06g01964 224 Pfam Domain of unknown function (DUF3527) 2 97 IPR021916 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01964 Gma-Chr6 23228295 23230668 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01964 126 214 U-box Gene Family AT5G40140 40.449 4.35e-14 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01964 - - gmx:100778683 198.749