Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01962 ATGTTGAAGACCTTGAGAGATAAGGTCAGTTTAAGGCTTATCTATGACAAACAAGGTGTCTGTCTTGTTTTGCGAGCTGTGTCTGAGTTGCTCCGATTTCCTCATCGTGGGGCACCATCAATTGAGTTAACAATCTTTGTTCCATTTCGGCATGAAACCCTAATTCACTCGCTTCTCGATCTCGTTAGAGCAATCTTTCCACGCTCGTCTTCGCGCTCCATCTGTACAAGAAGATCCGTCACGAGCGTTGGTTATACGATGGATGGGAACAAGGACGACGCGTTGAAATGTTTAAGAATCGGCAAAGAGGCGATGGAAAGCGGCGATCGGTCACGCGCTTTGAAGTTCGTGACGAAGGCGCGTCGCCTCGACCCCACTCTCCCCGTCGACGATCTATTGTCCACGATAGAGGTGGATGCAGGGGATCAGGCCCCCGCCGCCGAGGCGGAGGGCCCCACGAAGCCCACTGATCAACCTTCTATCCGCCGGAGGGCCACCGGGGCGGCTGCGACCGTCTCGGCCGGGCcctcgtcggcctcgtcctcttcggcctcgtACACTGAAGAGCAAGTCTCAATTATTAGGGAAATTAAGAGGAAGAAAAACTTTTATGAGATATTGGGATTGGAGAAGACTTGCACTGTTGAGGATGTGAGGAAATCGTACAGGAAACTGTCTCTTAAGGTTCATCCCGATAAGAACAAAGCCCCTGGTGCCGAGGAAGCATTCAAGGCCGTTTCAAAGGCGTTTCAGTGTCTTAGTAATGAAGAGAGTAAGAGAAAGTATGATGTTTCGGGTGAGGATGAAGCGGTTTACGAGCAGCGTGCGGCAAGGCCGGCGGCCCGAGGTTATAATGGTTACTATGAGGCTGATATTGATGCTGAGGAGATATTCAGGAACTTCTTTGGAGGAATGGCCCCTGCAGCCAATTTTGGAGGATTCAGTTTTGGACCAGCTGGTTTCAATGGGTTCAATGGTCATAGGCATGCTGCTGATCATGGTTCTGGTGGTTTTAATGTTCGCGCTTTAATTCAGTTGCTGCCTGTGCTGCTGATTGTGTTATTGAACTTTTTGCCTTCATCGGAGCCCTTGTACTCGCTTTCGAAGAGTTATCCTTATGAACATCGGTTTACCACACCCAAGGGTGTTAACTATTATGTCAAGTCTACAAACTTTGTTCAGGAGTATCCGTTGGGGAGTGATGAACGATCAAAAATTGAAGAGAGGGTAGAGAGGGAGTACTTCAGCATTCTCCGCCAGAATTGTCATTTCGAGTTGCAGCGTCGCCAATGGGGGTATATCCGGGAAACACCCCATTGTGATATGTTGCGGAAGTTTGAGGTGGTGAATTGA 1353 0.4789 MLKTLRDKVSLRLIYDKQGVCLVLRAVSELLRFPHRGAPSIELTIFVPFRHETLIHSLLDLVRAIFPRSSSRSICTRRSVTSVGYTMDGNKDDALKCLRIGKEAMESGDRSRALKFVTKARRLDPTLPVDDLLSTIEVDAGDQAPAAEAEGPTKPTDQPSIRRRATGAAATVSAGPSSASSSSASYTEEQVSIIREIKRKKNFYEILGLEKTCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNEESKRKYDVSGEDEAVYEQRAARPAARGYNGYYEADIDAEEIFRNFFGGMAPAANFGGFSFGPAGFNGFNGHRHAADHGSGGFNVRALIQLLPVLLIVLLNFLPSSEPLYSLSKSYPYEHRFTTPKGVNYYVKSTNFVQEYPLGSDERSKIEERVEREYFSILRQNCHFELQRRQWGYIRETPHCDMLRKFEVVN 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01962 450 MobiDBLite consensus disorder prediction 142 186 - -
Gma06g01962 450 Pfam DnaJ domain 202 263 IPR001623 -
Gma06g01962 450 ProSiteProfiles dnaJ domain profile. 202 266 IPR001623 -
Gma06g01962 450 SUPERFAMILY Chaperone J-domain 154 262 IPR036869 -
Gma06g01962 450 SMART dnaj_3 201 258 IPR001623 -
Gma06g01962 450 CDD DnaJ 202 255 IPR001623 -
Gma06g01962 450 Gene3D DnaJ domain 198 311 IPR036869 -
Gma06g01962 450 PRINTS DnaJ domain signature 204 222 IPR001623 -
Gma06g01962 450 PRINTS DnaJ domain signature 238 258 IPR001623 -
Gma06g01962 450 PRINTS DnaJ domain signature 222 237 IPR001623 -
Gma06g01962 450 PANTHER AT29763P-RELATED 87 448 - -
Gma06g01962 450 ProSitePatterns Nt-dnaJ domain signature. 243 262 IPR018253 -
Gma06g01962 450 Pfam Domain of unknown function (DUF1977) 359 430 IPR015399 -
Gma06g01962 450 PANTHER - 87 448 - -
Gma06g01962 450 MobiDBLite consensus disorder prediction 171 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01962 Gma-Chr6 23156235 23160926 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01962 48 263 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 25.446 1.57e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01962 K09518 - gmx:100793797 673.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01962 06 23156235 23160926 Gma06g01962 06 23156235 23160926 ECH