Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01948 ATGGGAACCTCTGCGAACGCTGTCGCAGGTGGTCGTGGCGGCGCCCCTGTCCCCAAAGACGTCGACTACGCTAATTACTTCTGCACCTATGCTTTCCTCTACCACCAGAAGGAGATGCTCTCCGACCGCGTTCGCATGGACGCTTACTTCGACGCCATTTTTCAAAACAAACGCCACTTCGCTGGCAAGACTGTTTTGGATGTGGGGACTGGAAGTGGCATTCTTGCTATATGGTCGGCACAAGCGGGTGCGAGGAAGGTGTATGCAGTGGAAGCAACCAAGATGTCAGAACATGCGCGTGCACTTGTCAAAGCGAATAATCTCCAGGATGTAGTTGAGGTCATTGAGGGATCGATGGAGGAAATTACCTTGCCAGAGAAAGTTGATGTGATCATCTCTGAATGGATGGGTTATTTTCTTCTGCGTGAATCTATGTTTGATTCAGTTATAAATGCTCGTGACCGCTGGCTCAAACCAACAGGAGTGATGTATCCTAGTCATGCTCGCATGTGGATGGCACCTATCCGGACTGGGATAGTAGATCACAAATTGGGCGATTACGAGTCGACTATGGATGATTGGCACCACTTTGTTGATGAAACAAAAACCTACTATGGTGTTGATATGAGCACTTTAACGAGGCCTTTTTCGGAGGAGCAGAGAAAATACTATCTACAGACATCATTGTGGAACAACCTTCATCCACATCAAGTCGTAGGAACTGCTGGTATAATAAAGGAAATTGATTGTTTAACTGCCACGGTGGCTGACATAGAGAAAGTCAGATCAGATTTTTCAATGTCAATAACCGTGGATAACACAAAGTTATGTGGATTTGGAGGGTGGTTTGATGTACATTTTCGGGGAAGAAGTGAGGATCCAGCTGAACAAGAGATTGAGTTAACCACAGCTCCCAGTGTAAATTATGGTACACACTGGGGCCAACAGGTTTTCCTCTTGCATCCTCCCATGCATCTGAGTGAAGGTGATGATTTAAGGGTTTCTTTTCTAATGAGTCGCTCAAAGGAAAACCATCGTTTGATGGAGGTTGAACTTGGATGTGAGATTCATCAGCATTCTGGCAAGCTACTTGCACCTTTCAAAAATAAGTACTACATTGAATAA 1125 0.4542 MGTSANAVAGGRGGAPVPKDVDYANYFCTYAFLYHQKEMLSDRVRMDAYFDAIFQNKRHFAGKTVLDVGTGSGILAIWSAQAGARKVYAVEATKMSEHARALVKANNLQDVVEVIEGSMEEITLPEKVDVIISEWMGYFLLRESMFDSVINARDRWLKPTGVMYPSHARMWMAPIRTGIVDHKLGDYESTMDDWHHFVDETKTYYGVDMSTLTRPFSEEQRKYYLQTSLWNNLHPHQVVGTAGIIKEIDCLTATVADIEKVRSDFSMSITVDNTKLCGFGGWFDVHFRGRSEDPAEQEIELTTAPSVNYGTHWGQQVFLLHPPMHLSEGDDLRVSFLMSRSKENHRLMEVELGCEIHQHSGKLLAPFKNKYYIE 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01948 374 Pfam Ribosomal protein L11 methyltransferase (PrmA) 61 134 - -
Gma06g01948 374 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE PRMT10 10 362 - -
Gma06g01948 374 Gene3D Vaccinia Virus protein VP39 20 165 IPR029063 -
Gma06g01948 374 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 20 351 IPR025799 GO:0016274|GO:0018216
Gma06g01948 374 CDD AdoMet_MTases 64 164 - -
Gma06g01948 374 Gene3D - 167 374 - -
Gma06g01948 374 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 10 362 IPR025799 GO:0016274|GO:0018216
Gma06g01948 374 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 30 358 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01948 Gma-Chr6 22680786 22688191 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01948 25 333 C2H2 Transcription Factor Family AT3G12270 32.239 4.63e-42 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01948 K11434 - gmx:100790625 763.837
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01948 06 22680786 22688191 Gma06g01948 06 22680786 22688191 ECH