Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01929 ATGATGCTGATGTGGCCACTTATTAACAGCATTGAGTCTGCTTACTTATGGTTTTCCCGTAGAATTAGGGTGATGAAAGTAGTGGAAACTCTGAGCAGCAAGTGCGAGAAACTTCAATCTCATTTTCAAGAGATCAATAATGAGGAACAAAAAGTGGGCACGAAGTCAGACCAAAGTGGATCAGTATTATTAGCTAGACCCGAGTTTTCGATGGCACAAAAGCCATCACAAATCTTTTTTAAAACCCATCCCAAGGACAATAGTTTGATGGTAAAAGATGGTTATCAGTGGAAGAAGTATGGACAGAAGAAGGTTACCAAAGACAATCCTTCGCCTAGAGCTTATTTCGAGTGCTCCCTGGCTCCTAGCTGCTCAAATTTGAAAAAGGTGCAAAGAAGCATACAGGATAAGTCTATCCTTGTTGCAACTTATGAAGGAAAGCACAACCATGGCGTTTTTCATGATTTACTCAAGCCATCATCTTCTATACCCGAAACCTCAATAATGATTAATAATTTACCTATAACAAACATGCCTAACGACAAAGATACGTTGAACATTGACCTTGCTCTATGTAATTCGGATCAAACAGATATAAGACTTTGTGATGATGTTAAGCAACAGAACCACCGTGGCAGCAAAAGCAAAATTGAAGAATATGTAACTCCTCTAGTTAAAGATCCTGACTTCATCATGCCATTAGCTGAAGCAGTTGCCCACTCCCTCAAGAGCCAGACTTATAAGCAAGAAGAAAGGGAGAAGGGGATAGACATGATTGTTGTTTCGGAGAAGAGTGCTGGAAATGATGCTAACAAGTGTCTTAGTAACACCAGTGACGCCAACACTGAGGGTTCAATATGGGGTTACTTCACGTGCAGGAGAAAGGAGGAGCAACACAAAGGAAGGCCCGCCGTTGTGGTGTTGTCAGAGAAGAAGCCGCCAAGGCCGCGCGACACACAGTGA 963 0.4216 MMLMWPLINSIESAYLWFSRRIRVMKVVETLSSKCEKLQSHFQEINNEEQKVGTKSDQSGSVLLARPEFSMAQKPSQIFFKTHPKDNSLMVKDGYQWKKYGQKKVTKDNPSPRAYFECSLAPSCSNLKKVQRSIQDKSILVATYEGKHNHGVFHDLLKPSSSIPETSIMINNLPITNMPNDKDTLNIDLALCNSDQTDIRLCDDVKQQNHRGSKSKIEEYVTPLVKDPDFIMPLAEAVAHSLKSQTYKQEEREKGIDMIVVSEKSAGNDANKCLSNTSDANTEGSIWGYFTCRRKEEQHKGRPAVVVLSEKKPPRPRDTQ 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01929 320 PANTHER WRKY TRANSCRIPTION FACTOR 49 27 243 - -
Gma06g01929 320 SMART WRKY_cls 91 152 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma06g01929 320 Gene3D WRKY domain 76 152 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma06g01929 320 ProSiteProfiles WRKY domain profile. 86 153 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma06g01929 320 MobiDBLite consensus disorder prediction 296 320 - -
Gma06g01929 320 Coils Coil 28 48 - -
Gma06g01929 320 Pfam WRKY DNA -binding domain 92 150 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma06g01929 320 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 27 243 IPR044810 GO:0003700
Gma06g01929 320 SUPERFAMILY WRKY DNA-binding domain 88 152 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01929 Gma-Chr6 21984180 21987449 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01929 66 254 WRKY Transcription Factor Family AT1G80840 38.889 8.40e-36 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma06g01929 WRKY 7.5e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01929 - - gmx:100817211 506.523