Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01926 ATGGCTTCATCTTCCTCCAACGGCAGTTCCAGCGGAAGCAAGAGTTGGGACATCGACGGCGACCTCGCCGGTTTCGGCTACAAAGTCCGTTCATCGGAGCTGCAACACGTGGCAGAAAACATGGAGCGTTTAGAGAACGTGATGGACATTGTGAACTCATCAACCAACAATAACATATCTCAGCTGGCCTCCGATACAGTCTTCTACAACCCCTCCGACATAGGTTCCTGGGTCGACACGCTTCTCTCCGAGTTCGACCAAACGGCGTCGTTGCCCTACGATTTCTCGGATTTTCTCGATCTCGACACGGATCAGAATCAAAACCACAAACCAACGCTGGTAACAATGGAAGAAGACTCAGGGATAAGACTCGTCCACACGCTGATGACCTGTGCGGATTCCGTGCAACGTGGTGACCTCGCATTCGCGGGCTCCCTCATCGAGAACATGCAGGGGCTGTTGGCTCACGTGAACACCAACATCGGAATCGGTAAAGTCGCTGGATATTTCATCGATGCCTTGCGCCGTCGCATCTTAGGGCAAGGCGTGTTTCAAACGTTGTCGTCGTCCTCGTATCCGTACGAGGACAACGTACTCTACCACCACTACTACGAGGCCTGCCCTTACTTGAAGTTCGCGCACTTCACGGCGAATCAGGCTATTTTAGAAGCTTTCAACGGTCATGATTGTGTCCACGTGATTGACTTCAATCTCATGCAGGGGCTCCAGTGGCCCGCGCTGATTCAGGCCCTGGCGCTTCGGCCCGGTGGGCCTCCGTTGTTGAGGCTCACGGGCATTGGGCCTCCCTCATCTGACAACCGCGACACGCTCCGCGAAATCGGGCTCAGGCTCGCTGAGCTGGCGCGGTCGGTTAATGTTAGATTTGCATTTCGTGGCGTGGCGGCGTGGCGGCTCGAAGACGTGAAGCCGTGGATGCTGCAGGTGAATCCGAACGAAGCCGTGGCGGTTAACTCCATCATGCAGTTGCATCGGCTTCTTGCTTCGGACTCCGATCCAATAGGTTCGGGCATCGAAACCGTGCTGGGTTGGATCCGAAGCTTGAACCCGAAGATTATTTCCGTTGTAGAACAGGAAGCGAACCACAACCAGGACCGGTTCTTGGAGCGGTTCACGGAAGCGTTGCATTACTACTCGACCGTTTTCGACTCGCTGGAGGCGTGTCCGGTCGAACCGGACAAGGCACTTGCGGAGATGTACCTGCAAAGGGAGATATGCAACGTGGTGAGCAGCGAGGGACCGGCGCGAGTCGAGAGGCACGAGCCGCTGGCTAAGTGGAGGGAGCGGCTCGAGAATGCCGGCTTCAAGCCGCTGCATTTGGGGTCAAACGCGTACAAGCAAGCCAGCATGTTGCTGACTCTTTTCTCTGCTGAAGGGTACTCCGTGGAAGAGAATCAAGGATGCTTGACTTTGGGGTGGCATAGCCGCCCTCTCATTGCGGCTTCGGCTTGGCAAGCTGCGCCGATGCAGGACAGGGAAACGCTGCGTTTCGAGCAATGA 1518 0.5586 MASSSSNGSSSGSKSWDIDGDLAGFGYKVRSSELQHVAENMERLENVMDIVNSSTNNNISQLASDTVFYNPSDIGSWVDTLLSEFDQTASLPYDFSDFLDLDTDQNQNHKPTLVTMEEDSGIRLVHTLMTCADSVQRGDLAFAGSLIENMQGLLAHVNTNIGIGKVAGYFIDALRRRILGQGVFQTLSSSSYPYEDNVLYHHYYEACPYLKFAHFTANQAILEAFNGHDCVHVIDFNLMQGLQWPALIQALALRPGGPPLLRLTGIGPPSSDNRDTLREIGLRLAELARSVNVRFAFRGVAAWRLEDVKPWMLQVNPNEAVAVNSIMQLHRLLASDSDPIGSGIETVLGWIRSLNPKIISVVEQEANHNQDRFLERFTEALHYYSTVFDSLEACPVEPDKALAEMYLQREICNVVSSEGPARVERHEPLAKWRERLENAGFKPLHLGSNAYKQASMLLTLFSAEGYSVEENQGCLTLGWHSRPLIAASAWQAAPMQDRETLRFEQ 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01926 505 Gene3D - 17 85 IPR038088 -
Gma06g01926 505 PANTHER OS05G0574900 PROTEIN 7 495 - -
Gma06g01926 505 Pfam GRAS domain family 124 491 IPR005202 -
Gma06g01926 505 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 7 495 IPR005202 -
Gma06g01926 505 ProSiteProfiles GRAS family profile. 115 491 IPR005202 -
Gma06g01926 505 Pfam Transcriptional regulator DELLA protein N terminal 19 89 IPR021914 -
Gma06g01926 505 SMART DELLA_2 19 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01926 Gma-Chr6 21918385 21920234 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01926 18 491 GRAS Transcription Factor Family AT1G14920 47.399 7.16e-159 460
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma06g01926 GRAS 4.7e-127 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01926 K14494 - gmx:100814551 979.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01926 06 21918385 21920234 Gma06g01926 06 21918385 21920234 ECH