Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01921 ATGCCATCACAAGCAGAGCTAAGCATGATGGATTACAAGCCCTACAGCTACTCCACACTGCTGAAATCATTTTTAGATCAAACTGAAACTGATCAGACCTACAAGCTTGAAGAGTTCCTCTCTCGCTTAGAGGAAGAACGTGTAAAGATTGATGCCTTCAAGCGCGAGCTTCCTCTCTGCATGCAACTCCTCACCAACGCTGTGGAGGCTTCAAGGCAGCAACTACAAGCCTTCAGATCAAACCAAGGAACGAGGCCAGTTCTGGAAGAATTCATGCCAATATTAAAGCATCCAAACTCTCAAGAAAGCGCTGAAAAAACATCAAACATATCTGACAAGGCGAATTGGATGACATCAGCTCAACTATGGAGCCAAGCAAGTGAAGGAACCAAACCACAATCCACAATTACATCATTACCTAAAGAAGGTGCTGATATTGGCTTTAGCGTGAGCCCGAAGCTAGCCCTAGACAACAAACATAGGAATGGGGGAGCCTTTTTACCATTCTCAAAAGAACGAAACTCGTGTCAAGGATTAAGGGGTCTTCCTGAGTTGGCCCTTGCATCTCCTGAGAAAGAAATTGAGGAAAATAAGTGTGAATTAGAGGCAGAGAAATGTTCGAAAAGGGAGAATCCAGGCAAAGGAGGGAGTTGTGAAGGGGTTAATGTTGATCAGGGAAAAAGTGCTTCAGTTGCATCTGAGGCACAAACAGCAAATACTACCACCACCACAACTAACACTAGTGGCCAAACTCATAGGAAAGCAAGAAGGTGTTGGTCACCGGATTTGCACCGTCGATTTGTTAATGCTCTTCAGATGCTTGGTGGATCTCAAGTGGCCACCCCAAAACAGATTAGGGAGCTGATGAAGGTTGACGGTTTGACCAATGATGAAGTTAAAAGCCATCTCCAGAAATATAGGCTTCACACTAGAAGACCCAGTCCGAGCCTACATACCGGAGGACCAACACCCCAGCTTGTAGTCCTTGGAGGAATTTGGGTGCCACCGGAATATGCCACAACTACAGCAGCCATGACAAATTCCGGTGACCCCACACTCTATGGCCCACATCCTACCTCACAAGTGGCACCACCACACTACTGTGCAGCCACCCAAATGCCCCAAGAATTCTATAACTCAGCGTTGCCGTTATCGTTGCTGCCACCACCACATGACTACACCCTTCATCATCATCATTTTCACATGTACAAGACAGCAGCACAGACACAAAACTCTCCGGAGTCCGATATTCGGAGCAGTGGCGACCGGTCAGAGAGCATTGTGGATGGGAAGTCGGAGAGTGGTAAATGGAATGGAGAGAGTGGAGAGAAGAAAGGGTTGGCAGCACTAAGAGATCAAGAAGGGGAAGAGAGCACTGGAAGTGAGATTACTCTTAAATTCTAG 1404 0.4672 MPSQAELSMMDYKPYSYSTLLKSFLDQTETDQTYKLEEFLSRLEEERVKIDAFKRELPLCMQLLTNAVEASRQQLQAFRSNQGTRPVLEEFMPILKHPNSQESAEKTSNISDKANWMTSAQLWSQASEGTKPQSTITSLPKEGADIGFSVSPKLALDNKHRNGGAFLPFSKERNSCQGLRGLPELALASPEKEIEENKCELEAEKCSKRENPGKGGSCEGVNVDQGKSASVASEAQTANTTTTTTNTSGQTHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPSPSLHTGGPTPQLVVLGGIWVPPEYATTTAAMTNSGDPTLYGPHPTSQVAPPHYCAATQMPQEFYNSALPLSLLPPPHDYTLHHHHFHMYKTAAQTQNSPESDIRSSGDRSESIVDGKSESGKWNGESGEKKGLAALRDQEGEESTGSEITLKF 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01921 467 Coils Coil 61 81 - -
Gma06g01921 467 MobiDBLite consensus disorder prediction 229 255 - -
Gma06g01921 467 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 254 309 IPR006447 GO:0003677
Gma06g01921 467 MobiDBLite consensus disorder prediction 418 461 - -
Gma06g01921 467 Coils Coil 36 56 - -
Gma06g01921 467 MobiDBLite consensus disorder prediction 406 467 - -
Gma06g01921 467 MobiDBLite consensus disorder prediction 229 254 - -
Gma06g01921 467 SUPERFAMILY Homeodomain-like 251 312 IPR009057 -
Gma06g01921 467 Gene3D - 253 311 - -
Gma06g01921 467 Pfam Myb-like DNA-binding domain 256 307 IPR001005 -
Gma06g01921 467 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 467 IPR044787 GO:0003700|GO:0006355
Gma06g01921 467 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 1 467 - -
Gma06g01921 467 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 251 311 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01921 Gma-Chr6 21727413 21730481 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01921 1 467 G2-like Transcription Factor Family AT2G03500 50.713 3.79e-124 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gma06g01921 Myb_DNA-binding 1e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01921 - - gmx:100809196 899.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01921 06 21727413 21730481 Gma06g01921 06 21727413 21730481 ECH
Gma04g01439 04 35340936 35343618 Gma06g01921 06 21727413 21730481 GST
Gma17g01122 17 9642615 9645261 Gma06g01921 06 21727413 21730481 PCT
Gma06g01921 06 21727413 21730481 Gma17g01122 17 9642615 9645261 PCT