Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01917 ATGCGCACCTCGTGGTCCCCTTTCGCGCTACTGAACATTCTAACCCTAGCTACTCTTCTTCACACTCCTTCACTCTCCAAAGAGCAAGCGCCGCTTCCACTCCTTCGTCCTGCAGGTCAAAAACATCGTCGTCCACGTCGACTACATGATCTTCGACAGCGATTGTTCCTCTTCCTCTGCCGCCTCGAACAATGGCCCTTTTTAGAACCTCCTCCCTCATCACTTTCCATGAGTACTGGTTCACAATCAAGCACATCACTACCCCTTCTCACTACTAGTGTGGATAATGGAGAGAATTCTTCTGATAACAAACAACCAAACACCTCGGCCACACTTAATTCCTCCCAAACCGGAGCCATTGAAACTGCACCCAAAAAGTCCATTAACACTTTTGGACAGAGAACTTCAATCTACCATGGTGTAAGAAGGGTTTTTGACTTAATTGAAGGCATAGGTGGACGGGGAGGTGGTTATGATAAAGAAGAAAAGGCAGCTAGAGCCTACGATTTGGCAGCACTAAAATACCGGGGAACAACCACAACAACAAATTTTCGAATATCATATCAAATTCTAGAGTTTCCTCAACTTTCTGAGGAGAGGATTTTATGCATTGGTTTCAACAGTAAGAGACCTGTTCTGAAATGGGAGAATAATATGGCATGGCCTGGCAAACTTACTCTTACTGATAAAGCAGTCTATTTTGAGGTTGCATGGGAAGCTTTGTCAAGGGTCATTATTTCAATACCCAAGGAGGTGCTGCCTTCTTATATAAAACTTGTCCGTGATGCCGTGTCAACATCCCGAGATAAGGAACGAAGGAAGAAGAAGGGAGGACCAATTCTCATACCTGGATTTTGTCTTCCAAAAGCACTTCAGACTATATTGCCAATTTTTCTCCAAGTACTCTTCTTTTCATTCAATTGA 924 0.4383 MRTSWSPFALLNILTLATLLHTPSLSKEQAPLPLLRPAGQKHRRPRRLHDLRQRLFLFLCRLEQWPFLEPPPSSLSMSTGSQSSTSLPLLTTSVDNGENSSDNKQPNTSATLNSSQTGAIETAPKKSINTFGQRTSIYHGVRRVFDLIEGIGGRGGGYDKEEKAARAYDLAALKYRGTTTTTNFRISYQILEFPQLSEERILCIGFNSKRPVLKWENNMAWPGKLTLTDKAVYFEVAWEALSRVIISIPKEVLPSYIKLVRDAVSTSRDKERRKKKGGPILIPGFCLPKALQTILPIFLQVLFFSFN 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01917 307 MobiDBLite consensus disorder prediction 72 125 - -
Gma06g01917 307 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR AIL1 74 143 - -
Gma06g01917 307 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR AIL1 155 188 - -
Gma06g01917 307 ProSiteProfiles AP2/ERF domain profile. 156 185 IPR001471 GO:0003700|GO:0006355
Gma06g01917 307 SMART rav1_2 137 191 IPR001471 GO:0003700|GO:0006355
Gma06g01917 307 Gene3D AP2/ERF domain 153 187 IPR036955 GO:0003700|GO:0006355
Gma06g01917 307 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 74 143 - -
Gma06g01917 307 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 155 188 - -
Gma06g01917 307 SUPERFAMILY DNA-binding domain 149 187 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01917 Gma-Chr6 21667959 21671301 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01917 74 187 AP2-EREBP Transcription Factor Family AT1G51190 44.697 8.38e-21 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01917 - K09285 gmx:100526744 145.591