Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01896 ATGCCGCCACTCCTATTCTTCAGTGAAAATCCAATTGGCAGAAACCACAGAAATTTGAAATTGAGACTACGATATAAAACGAACCCTAACTCCTTCTTCATCTCTCTATCTATCTTCCTCTTCAAGCAACATTTCCACACTGTTATCACAGCCATCCCCACCCGCCTTCCTCCCATGGACGGGCGACGCGCCTCGCGGGCCTCTGCGGCCGACCCCAAAGTGAGGCGCATCGGCTTCTTCGCCCCGCAGTCCGAACCCGACCCGACGCCGCCGCCTCCAAACTTCGTCTCGGTTCCTCCGCTGCGTCATCTCTCCGCTGCCGTGCCCGTCCCCGACACCGGGATTCGGCGCCAGTTGTCCGGCGACCTCGTGCCAATTGGAAGCTACAACCCCGCCGAGTCGCTGCTCGGGACCTCGCCGGCGGCGTCTTCGCTCTCTTCAAGCATAGTTGGCGTCGGCGACAAGGAGTTCTCCGAAGACTCTTCCGCCGCCGGCTGGTACCGTCGCGGCGACTCGGATTTTACCGGCGTAGGGTTTGACTTGCCGGTAGTGAAGCCTCCTGGAAATTCGCCGGCGGTGAATGCGAAAAACGTTGCCGGAGAAAAGAGGGAAGAGTCTGGCAAAGAAGTACACCCTGATCTGCCATCAATTTCAAAGCCACTGAAAGAAAAAAATACAAAGGGTGAGAGACGAGCATTGCAGGAGGCACAAAGAGCTGCAAAAGCTGCTTCTAAAGCTGATGGAAACACAACAGTTGCTGAAACTAGGAGGGCAGCCCCCAGTAAAAGAATGTGGCAGTCTTCACAAAAGAAAGATGGTCCTCTTGTTATGTCACCAGTGGCTACTGACAAGAAATCAGGAGATCGTCCTTTGGAGAAAGAGAGGAAAAAAGATGCTCCTCCTCCACGAATGCAATTTGATGATAAAAACAGAGTGGAAAAGGCCAAAAGGCGTGCTGTAGTTGATCAGAATGAAGCTAGAAACAGAGTTGAATTATTTCGCCATTTGCCTCAATATGAACGTTGGACTCAGCTTCCTAAACTTGAATCAAAGTTTTTCCAACTGGATTCAGTGCATCCTGCTGTGTTCAAGGTTGGAATGCGTTATTTGGCAGGAGATATATCTGGGAGTAATGCCCGATGTATTGAAATGCTTAGAGCATTTCAGGAAGCCATTATAGACTACTCCACACCGCCTGGGAAAGTCCTTGTCAGGGATTTAACTGCAAAAATCAGTAGTTATGTTTCATTTTTTAGTGAATGCAGACCACTTTCTATTAGCATGGGAAATGCAATTAGGTTTGTAAAGAGTTGTGTTGCCAAGTTGCCTTTAAGTCATACTGAATCTGAAGCAAAAGCAGCTCTTTGTTCAGATATTAATCAATTCATCAACGAAAAAATAATTCTTGCTGATAAGGTGATTGTTGGACATGCTGCTTCGAAAGTTAGGGATGGAGACGTTCTTCTTACATATGGATCATCATGTGTTGTTGAGATGATTCTTTTATATGCCCATGATCTTGGGAAACAGTTCCGTGTTGTGGTGGTAGACTCACGACCAAAGTTTGAAAGCCGGGCCTTACTTCGTAGACTGGTGGCTAGGGGCCTGAGTTGTACATATACCCATATAAATGCTGTTTCTTATGTCATGCATGAGGTCACACGAGTTTTTCTTGGAGCATCTTCCATTCTGTGTAATGGAACTGCATATGCAAAGGTTGGGACTGCATGTGTTGCAATGGTAGCTCATACATTTCGTGTTCCTGTATTGATCTGTTGTGAAGCTTATAAGTTTCATGAAAGGGTGCAACTTGATTCAATATGTTCTAATGAACTAGGTGACCCAGATGCTGTTGCCGTGGTTCCTGGAAGAATGGATGTCAATTATCTGGACAATTGGACTAATCAAGACAATTTGCAGCTTCTGAATTTGTTCTATGATGCTACTCCTTCAGATTATGTATCGGCCATTGTTACAGACCATGGAATGATCCCTCCTACAAGTGTGGCCGTAATTGTGCGCGAGTATGGACGAGAGCACTTGATCTAG 2049 0.469 MPPLLFFSENPIGRNHRNLKLRLRYKTNPNSFFISLSIFLFKQHFHTVITAIPTRLPPMDGRRASRASAADPKVRRIGFFAPQSEPDPTPPPPNFVSVPPLRHLSAAVPVPDTGIRRQLSGDLVPIGSYNPAESLLGTSPAASSLSSSIVGVGDKEFSEDSSAAGWYRRGDSDFTGVGFDLPVVKPPGNSPAVNAKNVAGEKREESGKEVHPDLPSISKPLKEKNTKGERRALQEAQRAAKAASKADGNTTVAETRRAAPSKRMWQSSQKKDGPLVMSPVATDKKSGDRPLEKERKKDAPPPRMQFDDKNRVEKAKRRAVVDQNEARNRVELFRHLPQYERWTQLPKLESKFFQLDSVHPAVFKVGMRYLAGDISGSNARCIEMLRAFQEAIIDYSTPPGKVLVRDLTAKISSYVSFFSECRPLSISMGNAIRFVKSCVAKLPLSHTESEAKAALCSDINQFINEKIILADKVIVGHAASKVRDGDVLLTYGSSCVVEMILLYAHDLGKQFRVVVVDSRPKFESRALLRRLVARGLSCTYTHINAVSYVMHEVTRVFLGASSILCNGTAYAKVGTACVAMVAHTFRVPVLICCEAYKFHERVQLDSICSNELGDPDAVAVVPGRMDVNYLDNWTNQDNLQLLNLFYDATPSDYVSAIVTDHGMIPPTSVAVIVREYGREHLI 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01896 682 SUPERFAMILY NagB/RpiA/CoA transferase-like 361 676 IPR037171 -
Gma06g01896 682 Gene3D - 470 676 IPR042529 -
Gma06g01896 682 MobiDBLite consensus disorder prediction 248 273 - -
Gma06g01896 682 MobiDBLite consensus disorder prediction 185 319 - -
Gma06g01896 682 Pfam Initiation factor 2 subunit family 374 666 IPR000649 GO:0044237
Gma06g01896 682 PANTHER NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN 59 681 - -
Gma06g01896 682 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 59 681 - -
Gma06g01896 682 MobiDBLite consensus disorder prediction 198 236 - -
Gma06g01896 682 MobiDBLite consensus disorder prediction 285 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01896 Gma-Chr6 20959250 20965620 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01896 59 682 Eukaryotic Initiation Factors Gene Family AT5G38640 57.252 0.0 679
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01896 K03680 - gmx:100778711 1270.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01896 06 20959250 20965620 Gma06g01896 06 20959250 20965620 ECH