Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01889 ATGGCTCTCGGCGACGATGCGCAGCACCACTCTCCCTCGTTCCTCGATGCCCTTCTCTGCGAAGAGCGAGAAACCTTCGAGGAAGACTTTGATGAAAATGGTTATGAGCGTGAGACCGAAAACAACGAACCCTCTGTGATAAAGTTGCAATCTTTGCCCTTGGTTTTGCACAATAATGACCTATTCTGGGAAGGCAAAGAGCTTGTGTCGTTAACTGCGAAAGAGGGAGAGATCCATTTGTGTTTTCATGGTGTCGTTGCTAATGGGGCCTTAGAAGGGCCTCGTGTTGAGGCTGTGAACTGGATTTCGAAAGTTGTGGGTGGTGGCGGCGAGGAGGACGAGGCGGTTAGCGACGAAGACAGACTGAACAGAGAGGTTGCGGGAGAGGAAGGAGGGGTGGCGGCGGAGGAGAAGGTGGTGGAGGGGTGGGTGGGGAGGGAGGGGGAGCCACGTGGCAGAGATGGGGTCGAAGGTGTGGAACTGGATGGTgGAGGAGGAGTGGGAGTGGGAGAGAATGGCATGGCTATGGCGGATTGGGGTTGTGGTGGTGGTGGAAGAAGAAGAAGAATTTTTGTGAACGTAAATTTTttttaccagatggTTGACTCTTCGTTCCTCCCTCTATTCTTTCGGATGGAGCCCATGGACATCGTTGGGAAGGCCAAGGAAGACGCTTCTCTTCCTAAAGCGACAATGACGAAAATTATTAAAGAGATGTTGCCCCCGGACGTGCGTGTCGCCAGAGATGCACAGGATTTATTGATCGAGTGTTGTGTCGAGTTTATAAACCTTGTCTCGTCAGAGTCCAATGAAGTCTGTAACAAAGAAGAAAGAAGGACGATTGCACCGGAGCACGTGTTAAAGGCTTTAGGGGTTCTTGGATTTGGCGAGTACATTGAGGAAGTTTATGCAGCATATGAACAACACAAGTTGGAAACAATGCAAGATTCTTTAAAAGGTGCAAAGTGGAGCAACAGAGCTGAGATGACTGAGGAAGAAGCATTGGCTGAACAGCAAAGGATGTTTGCAGAGGCACGTGCAAGAATGAATGGAGGAGCCATTCAATCCAAGGAGCCAGAGGCTGACCAAAGTTTAGAGAGCTAA 1104 0.4937 MALGDDAQHHSPSFLDALLCEERETFEEDFDENGYERETENNEPSVIKLQSLPLVLHNNDLFWEGKELVSLTAKEGEIHLCFHGVVANGALEGPRVEAVNWISKVVGGGGEEDEAVSDEDRLNREVAGEEGGVAAEEKVVEGWVGREGEPRGRDGVEGVELDGGGGVGVGENGMAMADWGCGGGGRRRRIFVNVNFFYQMVDSSFLPLFFRMEPMDIVGKAKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNEVCNKEERRTIAPEHVLKALGVLGFGEYIEEVYAAYEQHKLETMQDSLKGAKWSNRAEMTEEEALAEQQRMFAEARARMNGGAIQSKEPEADQSLES 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01889 367 SUPERFAMILY Histone-fold 223 355 IPR009072 GO:0046982
Gma06g01889 367 PANTHER PROTEIN DR1 HOMOLOG 212 366 IPR044255 -
Gma06g01889 367 Gene3D Histone, subunit A 216 356 IPR009072 GO:0046982
Gma06g01889 367 Coils Coil 326 346 - -
Gma06g01889 367 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 225 290 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01889 Gma-Chr6 20824035 20831057 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01889 212 363 CCAAT-DR1 Transcription Factor Family AT5G23090 83.766 1.09e-89 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Gma06g01889 CBFD_NFYB_HMF 3.9e-22 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01889 K21751 - gmx:547635 308.145
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01889 06 20824035 20831057 Gma06g01889 06 20824035 20831057 ECH