Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01874 ATGAGCAACCCTTCAGATGAAAGGGAGCAGTGTCAAAAGAAGAGGAAATCCACCATATGCGAAGCCTCTAACTTTAGGACATCAAGGAGAAGATTCTGCAGCAACAACAAAAATGAAGAGGAGATGAACAATAAGGGAGTTTCAACAACACTGAAGCTTTACGATGATCCTTGGAAGATCAAGAAGACGCTAACCGATAGCGATTTGGGAATCCTAAGTAGACTCTTGCTGGCTGCAGATTTGGTGAAGAAACAAATTTTGCCTATGTTGGGTGCATATCATGCAAGAGCTGCAGAAACTGAAGGGACCCCAGTTAGAGTTTGGGACATGGACACCAAATCCATGCACCAACTCGTTCTAAAGCGATGGTCTTCATCCAAGAGCTATGTTCTTATTGGAAAGTGGAACCAAGATTTCGTCAGAAGAAGAGATCTCAGGAAAGGAAAATTTTCCCTTCATCGCTTGTTGAATGGATACTGA 480 0.4271 MSNPSDEREQCQKKRKSTICEASNFRTSRRRFCSNNKNEEEMNNKGVSTTLKLYDDPWKIKKTLTDSDLGILSRLLLAADLVKKQILPMLGAYHARAAETEGTPVRVWDMDTKSMHQLVLKRWSSSKSYVLIGKWNQDFVRRRDLRKGKFSLHRLLNGY 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01874 159 Gene3D - 57 155 IPR015300 -
Gma06g01874 159 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 5 148 - -
Gma06g01874 159 SUPERFAMILY DNA-binding pseudobarrel domain 56 149 IPR015300 -
Gma06g01874 159 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 5 148 - -
Gma06g01874 159 CDD B3_DNA 58 150 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01874 Gma-Chr6 20497825 20499501 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01874 22 148 B3 DNA Binding Superfamily AT1G25560 29.457 1.15e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01874 - - gmx:102666452 295.434