Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01869 ATGTGGGCTGGTCACGGTTTGAGATCCCGCACTAGAGATTCCTTCTCTCGTCCCTTCAGGAAGAAGGGTGCCATCACCCTCACCACATACCTCAGAACCTACCACGTTGACGATTATGTCAACGGAATTGCACACAAGTTATACCATGGCTGCACCGGTCGCGTTTGGAATGTCACCAAACATGCTGTTGGGGTCGAAGTCAATAAGCAGGTCGGCAACAGAATCATAAGGAAGAGGATTCACGTGCGTGTGGAGCATGTTATGCCATCGAGGTGCACTGAGGAGTTCCGCCTTAGGAAAATCAAGAATGATCAGCTCAAGGCTGAGGTCAAGGCCAAGGGTGAGAAGATCAGCACCAAGAGACAGCCTCAGGGTCCCAAACCTGGTTTCATGGTCGAGGGGGCAACGTTGGAGACAGTTACCCCTATTCCCTATGATGTCGTCAATGACCTCAAGGGAGGTTTTATGTTGCCTCCCAGTGATGGTATTGGTGTTGTTGTTGATGCTTCTGTGTTTCACGAGTCGTTTCTTGCTGGCGGTATTGCAAAGCTGCTTCTTGGTAACGTTCTCAAGGAAGGAACTGCAATTTCTATCAACCCTCTTGTGATTTCATCAATGCCATAA 624 0.492 MWAGHGLRSRTRDSFSRPFRKKGAITLTTYLRTYHVDDYVNGIAHKLYHGCTGRVWNVTKHAVGVEVNKQVGNRIIRKRIHVRVEHVMPSRCTEEFRLRKIKNDQLKAEVKAKGEKISTKRQPQGPKPGFMVEGATLETVTPIPYDVVNDLKGGFMLPPSDGIGVVVDASVFHESFLAGGIAKLLLGNVLKEGTAISINPLVISSMP 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01869 207 Pfam Ribosomal protein L21e 1 92 IPR001147 GO:0003735|GO:0005840|GO:0006412
Gma06g01869 207 PANTHER 60S RIBOSOMAL PROTEIN L21 1 155 IPR001147 GO:0003735|GO:0005840|GO:0006412
Gma06g01869 207 SUPERFAMILY Translation proteins SH3-like domain 4 90 IPR008991 -
Gma06g01869 207 PANTHER 60S RIBOSOMAL PROTEIN L21-1 1 155 - -
Gma06g01869 207 Gene3D - 90 147 - -
Gma06g01869 207 Gene3D Ribosomal protein L21 1 88 IPR036948 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01869 Gma-Chr6 20330104 20333961 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01869 1 155 Cytoplasmic Ribosomal Protein Gene Family AT1G09690 75.000 7.90e-87 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01869 K02889 - gmx:100305629 286.574