Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01852 ATGGGACGAGCCCCATGCTGCAACAAGGTAGGTTTAAAGAAAGGACCATGGACTCCTGAGCAAGATCAAAAGCTCTTAGCTTATATTCAAGAACATGGCCATGGAAGCTGGCGTGCCTTTTTACCAAAAGCTGGCAATTCTTCTTCTCTTTTGAAAGAAGAAGGCGAGCAAGAGTGGAAAGGTAGTTATGGTAGTTCCATCACTAGTTTTAGTTCTAGTCTGCATGATGAGTTCACAATGAACATGGAAGGCACGTGGGCCTCTGAGTTCCTTAGGCCTAGTGGCTCACATGATGATCACATTGTTGAAGAAGGCTTCACCAATCTTTTGCTTAAAACAAACTTTGACGACCCAACTTTGTTGTCGGAGGGTGGGGGACATAACCATTTTCCGTTGCACCGGCGTACGTGTCAAGACTCATTCAGCCTACTGTTGATATATAGTTTATATGGTTCCTTATCAACCCATCAAAGCCAAAACCAACTCCTCAAATCCTTTATATTGCTTGTCGGAGGAGTTAAGCGATCAAGTGAAGAAATTTTAAGGGACATGAATCCGGACGAGGATGTTCGCTCGGTTGCAACAATCCCATCTGTGAAGGAACTCCACAAAGCTGGGATTGGGTTTCAACCTGCGAAATTAGGAGGAATCTCAGGCATTGAATACGATGAAGGAACGTGCATGTTATCTTTGCCTAGTATCAAGTTGAATGTCAACTAA 720 0.4375 MGRAPCCNKVGLKKGPWTPEQDQKLLAYIQEHGHGSWRAFLPKAGNSSSLLKEEGEQEWKGSYGSSITSFSSSLHDEFTMNMEGTWASEFLRPSGSHDDHIVEEGFTNLLLKTNFDDPTLLSEGGGHNHFPLHRRTCQDSFSLLLIYSLYGSLSTHQSQNQLLKSFILLVGGVKRSSEEILRDMNPDEDVRSVATIPSVKELHKAGIGFQPAKLGGISGIEYDEGTCMLSLPSIKLNVN 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01852 239 CDD SANT 16 39 IPR001005 -
Gma06g01852 239 Gene3D - 11 60 - -
Gma06g01852 239 ProSiteProfiles Myb-like domain profile. 9 63 IPR001005 -
Gma06g01852 239 Pfam Myb-like DNA-binding domain 14 39 IPR001005 -
Gma06g01852 239 SUPERFAMILY Homeodomain-like 11 41 IPR009057 -
Gma06g01852 239 PANTHER MYB TRANSCRIPTION FACTOR MIXTA-LIKE PROTEIN 1 45 - -
Gma06g01852 239 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 45 - -
Gma06g01852 239 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 38 IPR017930 -
Gma06g01852 239 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 51 130 - -
Gma06g01852 239 PANTHER MYB TRANSCRIPTION FACTOR MIXTA-LIKE PROTEIN 51 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01852 Gma-Chr6 19923584 19925654 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01852 1 45 MYB Transcription Factor Family AT5G15310 80.000 2.84e-21 87.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gma06g01852 Myb_DNA-binding 4.4e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01852 K09422 - gsj:114371780 161.77