Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01845 ATGGAACATACCATGTTACCTGCCATTGGATCTGTTTTCCCTCGTGGTGTCTTTGCCGCACTCTTGCTCATGTTACTGTTTTCTTTCTCCACATTCACTTCTATAGAAGCCTATGATCCACTTGATCCTACCGGAAATATAACAATCAAGTGGGATGTCATTAGCTGGACTCCAGATGGCTATGTTGCTGTTGTCACAATGTACAACTTTCAACAATATCGCCACATTCAGGCCCCCGGATGGTCATTAGGGTGGACATGGGCTAAAAAGGAAGTGATTTGGAACATGATGGGAGCCCAAACCACAGAGCAAGGGGACTGTTCAAAGTTCAAAGCAGGCATTCCACATTGTTGTAAGAAGGACCCTACAGTTGTGGATTTACTGCCAGGGACTCCTTACAACCAGCAGATTGCAAATTGTTGCAAAGGGGGTGTCCTAAATTCATGGGGTCAGGACCCCAGCAATGCAGTAAGTTCTTTCCAGATTAGTGTTGGTTCTGCCGGAACAACAAACAAAACCGTCAAAATGCCTAAAAATTTTACCCTCAAAGCACCGGGACCTGGCTATACTTGTGGTCCTGCCAAAGTTGTGAAACCAACTGTATTTATTACCAATGACAAGAGGAGAACCACCCAAGCCATGATGACCTGGAATATTACCTGCACTTATTCTCAATTCCTGGCTCAAAAGGCACCAAGTTGCTGTGTTTCCCTCTCATCCTTCTATAATGACACAGTAGTAAACTGCCCAACCTGCACCTGTGGTTGCCGAAACAAAACAGAACCTGGCAGCTGTGTAGATCCAAATTCGCCACATTTAGCTTCAGTTGTATCAGCATCAGGCAAAACGGCAAACACGCCACTAGTCCAGTGTACCAGCCATATGTGTCCTATTCGAGTGCATTGGCATGTGAAGCTCAATTACAAAGAGTACTGGAGGGTCAAGATCACAATCACAAATTTCAATTACAGAATGAACTACTCTCAATGGAACCTTGTTGTGCAGCATCCTAATTTAGATAATATTACCCAGCTCTTCAGTTTTAATTACAAGTCACTAAATCCCTATGAGGGCTTGAATGATACAAGTATGCTGTGGGGAGTCAAGTTCTACAATGATTTTCTTTCTTCAGCTGGATCTCTTGGTAATGTTCAGTCAGAAATCTTACTTAGAAAAGACAAATCAACCTTCACATTTGATAAGGGATGGGCCTTCCCTAGAAGAATTTATTTCAATGGGGATAACTGTGTTATGCCTCCTCCAGATGCCTACCCCTGGCTTCCAAATGCAAGTTCTAAACTAGTTTTCTCTTTACTCAGTACAGTCATAGCCACTTTAGCTTCTTTGTTAATCTTATTGAATCAATCATAG 1371 0.4274 MEHTMLPAIGSVFPRGVFAALLLMLLFSFSTFTSIEAYDPLDPTGNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWSLGWTWAKKEVIWNMMGAQTTEQGDCSKFKAGIPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWGQDPSNAVSSFQISVGSAGTTNKTVKMPKNFTLKAPGPGYTCGPAKVVKPTVFITNDKRRTTQAMMTWNITCTYSQFLAQKAPSCCVSLSSFYNDTVVNCPTCTCGCRNKTEPGSCVDPNSPHLASVVSASGKTANTPLVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYRMNYSQWNLVVQHPNLDNITQLFSFNYKSLNPYEGLNDTSMLWGVKFYNDFLSSAGSLGNVQSEILLRKDKSTFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWLPNASSKLVFSLLSTVIATLASLLILLNQS 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01845 456 PANTHER COBRA-LIKE PROTEIN 15 453 - -
Gma06g01845 456 Pfam COBRA-like protein 61 224 IPR006918 GO:0010215|GO:0031225
Gma06g01845 456 PANTHER PROTEIN COBRA 15 453 IPR006918 GO:0010215|GO:0031225
Gma06g01845 456 PIRSF COBRA 10 455 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01845 Gma-Chr6 19698826 19703178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01845 20 453 COBRA Gene Family AT3G02210 72.874 0.0 701
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01845 - - gmx:100815779 953.355
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01845 06 19698826 19703178 Gma06g01845 06 19698826 19703178 ECH