Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01838 ATGACTAACCTCAGTTTCAGACTTCAGAGGTTTAGGCACTCTGGTTTTCTTCTTCACATTGTTGCCACTCTGATGCTTCTTATTCCTATACTTGAGAAAATTAAAAATAATAGAAAAGGTCTTGTTGAAGGTATCATACTGAATGTTTATCTTTCAAAACTGGTGGAAGAGAAAGGATTAACTGCTGAGACAGCTGACAAAACTGAAACTTTTGTCAAAGAAAAAGGACCTCCTCTAGCATTGTTGTTTAAATTTAGAGAAGGCAGTACTTTCTTAAAAGATGATGGATTCGTTGCTGCATTGAATGACCTGGAAATTTTATTTAAACTTATGGATAAATCAAAAGGCCCTGATAAAGTGGTTTTTGACTTGAGTCTTGCCCGAGGTCTTGACTATTATACTGGAGTTATATTTGAAGTTGTCTCTAAAGGGGATACTCAACTTCCACTTCTAGAGAGCCCAAAATTGCTTCAATCTGCTTCTGCCATAACCCCTATTAATAATCCCATGGAAGCATATGTTCTAGACCATTTAAACCACTCAACTTCTCTGCTTCCCCCATTACTCATACAACAAGAAAATGTTGGTCAGCAAAACTTTCAGGCAACCTATGGCAACATTAACAATTCCAATGAACAAGCAGTGGATCCGGTAACTAATTGGCGAGTGCTTGACAAGTTTGTTGCTTCACAACTTAGTCAAGATGCTTCCAAAGACAATATCTTTCAAGGCACGGCCAATAGCAGTGGACAGTTTAGACATTTGGACAAACAAGAGCTAGTGGTGCCTGAACAAAATGCATCAACATCAAACTCCAGCTGCCCAATTGATTTGTGGAAATAG 843 0.382 MTNLSFRLQRFRHSGFLLHIVATLMLLIPILEKIKNNRKGLVEGIILNVYLSKLVEEKGLTAETADKTETFVKEKGPPLALLFKFREGSTFLKDDGFVAALNDLEILFKLMDKSKGPDKVVFDLSLARGLDYYTGVIFEVVSKGDTQLPLLESPKLLQSASAITPINNPMEAYVLDHLNHSTSLLPPLLIQQENVGQQNFQATYGNINNSNEQAVDPVTNWRVLDKFVASQLSQDASKDNIFQGTANSSGQFRHLDKQELVVPEQNASTSNSSCPIDLWK 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01838 280 Gene3D Bira Bifunctional Protein; Domain 2 29 154 IPR045864 -
Gma06g01838 280 Pfam Histidyl-tRNA synthetase 50 147 IPR041715 -
Gma06g01838 280 PANTHER HISTIDYL-TRNA SYNTHETASE 53 143 - -
Gma06g01838 280 PANTHER HISTIDYL-TRNA SYNTHETASE 53 143 - -
Gma06g01838 280 SUPERFAMILY Class II aaRS and biotin synthetases 55 144 IPR045864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01838 Gma-Chr6 19618969 19623070 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01838 177 280 NAC Transcription Factor Family AT1G12260 41.964 6.36e-14 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01838 K01892 - gmx:100815845 251.521