Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01833 ATGATGTTGACGATGATGGCAAGTTCAAGAGAAGGTTATCAAGCAAAGCAAGAGGGTGACACAACCACTAATATTGACAAGTTCTCCAAGGCATCTTCTACTACTTCAAGACAATGGTCAGCGTTCAGAAATCCAAGAATTGTGAGAGTGTCTCGTTCTTTTGGAGGGAAAGATAGGCATAGCAAGGTTTGCACCATAAGAGGGTTGAGGGACAGAAGGATTAGGCTCTCGGTTCCCACAGCTATTCAGCTATATGATCTTCAAGACAAGCTTGGACTAAGCCAACCAAGCAAAGTGATAGATTGGTTGCTTGAAGCCACTAAATTTGACATTGACAAGCTCCCTCCACTCCAATTCCCTCAGGGTTTTGGTCAATTTCATCATCATCCACAAACCCTATTCCCTTTTCATGAATCAAGTGCTGCCTCTCATCAGCTGTCTCTTGGACCCTTCAGTGATGCTAGCTCCACTTTTGTGAGGGATGGAGGGATTCAAAACCTCATGGCAAAGTCAAGGTATTGGGAGAACATAAACTCAATGTCAAGATTAAGAGGCAATAAGGAAGCTGAAAAGGGCAAGTGGATCAAAACAAGTGAAGAAGAGAATCATGATCAAGATGGTGTTGTTGGAGGTTACAACAACTTGCAAGTTTCTACTCAAAGGCTTTTCCCAATGGGTAGTAGTAGTACTACTACTACTCACTCCCTTTTACCTGGTTTGTTAAACAATTCCATGCCATATAACGCCTACAGTTCTGAGCCTTCTAGTTTATCTTTATCCCAATTTGGAAGCCATGGATTGTTCCCTTCTCAACAAGTAGATCCTAATCCAAGCAGTGGCAACAATGGTGTGCAATTCCAATCTTCTTTGTCATTACCTTCATCGGGCTCTCAATTATTGTTTGGCTCATCTTCTGCTACACCATCAATGTTCACCACCTATGCTCCATTTATTGCACCCTCAGTGGACCCTGATCCAAGACAGTTCAACCACATTCATCAGTTCTTGAACTCAGGCTCTCAAATCTTGCCTCCTCATCCTCTCATACCATCTCTTCATCACTCATTCAATTCACAGATCAGACCCTTCCCAGCAGCACTCTTTAGTTCAAAGCTTTTGGATTCAGACAGCAGCAACCATAGCCAACAAGATCATAAGGGTAGCACTTCTTGA 1173 0.4288 MMLTMMASSREGYQAKQEGDTTTNIDKFSKASSTTSRQWSAFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLGLSQPSKVIDWLLEATKFDIDKLPPLQFPQGFGQFHHHPQTLFPFHESSAASHQLSLGPFSDASSTFVRDGGIQNLMAKSRYWENINSMSRLRGNKEAEKGKWIKTSEEENHDQDGVVGGYNNLQVSTQRLFPMGSSSTTTTHSLLPGLLNNSMPYNAYSSEPSSLSLSQFGSHGLFPSQQVDPNPSSGNNGVQFQSSLSLPSSGSQLLFGSSSATPSMFTTYAPFIAPSVDPDPRQFNHIHQFLNSGSQILPPHPLIPSLHHSFNSQIRPFPAALFSSKLLDSDSSNHSQQDHKGSTS 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01833 390 MobiDBLite consensus disorder prediction 266 290 - -
Gma06g01833 390 PANTHER TRANSCRIPTION FACTOR TCP17 5 386 - -
Gma06g01833 390 MobiDBLite consensus disorder prediction 1 30 - -
Gma06g01833 390 ProSiteProfiles TCP domain profile. 56 114 IPR017887 -
Gma06g01833 390 Pfam TCP family transcription factor 56 166 IPR017887 -
Gma06g01833 390 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 5 386 IPR005333 GO:0003700
Gma06g01833 390 MobiDBLite consensus disorder prediction 10 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01833 Gma-Chr6 19487272 19488444 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01833 10 321 TCP Transcription Factor Family AT5G60970 41.486 1.36e-57 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gma06g01833 TCP 4.8e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01833 - - gmx:100804574 735.332