Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01827 ATGAAGGAGGTTATGATTAAATGGAAGCCAGACTTCTTTGAAGTTCACACTCAATTTGTCAAGACCTCAACATTTTGGAGAATGAGTATTTATGAGCCTGTTTATATCCAAGAAGCCAGGGGGCAATTGGGGGGCATATGGGTTTTAAGGAGGAATGACTCACCATACTCCTTTACAACCTATGATGTTCATCCACAATGTATTTCAGTTCTCATTGAGTTCAGAAGACAATCTTGGCTATGTTTAGGAGTTTATGCTAGTCCTAGAGCAGAGCAACGTGGGAGTGAGTTTGATCAGAACCGTGCTACCATATTTGCGCAGAATATTGATGATTGTCGACTCTTGTGTTTGGACCATATCGTTGGAACAAAAAGCCAAATTGACTGGGTTCAAACTTTAAGGTTTAAATCCACTTATTGTTCCTTTGAGGACCAAAAAGCATATTCTTCATTCTTACAAGCTACAACTTTTTTAACCTTTTCTTGTTTAAAGCAGTTCTGTGTGGATTTCTTCTTGCTCTTTACATTCTTTGCTGAGATGGAAGAAAATAAATCTGTGATTTCCACCTGTGAGCAAGATCAACATGTGGTTGCTGCTGCTCAGCACATTTTGAAGGCACTAGCAGCAAGTAAGACTGTATCTGAAGACTTGAGAAAAACCCTATTGGATCTTGAGACACAATTGTCTTCAATTTCCATAGTCAATGAGAGAAAACGAACAGGAATCAAGCAATTTGAGAGGCAGCTTAAGTGTGTTGAAGACAAGGTAATGAAATGGGAGACAAACCCTTCTTCCAATGAGTCTTGTGAGTATTTGAAAGTTGTTGGTGAAATCCAAACACTGATCCAGAGTTTGGAAAACTTTTCTGTGAATGAAAAGGGGAAGCCTAAGGAACTTCTAAGGAGGGCCAATGAAATTCTGCAGGTTGCTATGCCAAGCCTTGAGAAAGAACTAGTCCACATTCTTGTCCAACATAAGCAATACTTTGAGCCTGAATACATGTCTTTCCATTCTAATAGAATGGATATTGTTTATGATGAATCGTTTCGTTTGGTCGAGGAAGAACAAATCAACGAGGCCTCCCGAAGTAGTAGCGGTGCTAGCCGCCAATCTGAGGCCAGCACTATTGATTTGGTGAATCCAACAGTGCTTCAACATCTCAAGAGCATTGCTAGTTTCATGTTTGGTTCAAAATACCATCAGGAGTTCTGTCAGGTCTTTGTTACATCGAGGAGGGATGCTTTAGCTGAGTATCTTGTCATTCTTGAGATGGAAAAGTTAAGAATTGAGGATGTGATAAAACTGGAGTGGCATTGCTTGAACAACGAGATAAAGAAATGGATTCGAGCCATGAAGATCATTGTTCGGGTGTACCTCGTCAGTGAGAAACGATTGTGTGAGCAAATCCTTGGTGATTTTGGATCCTTTTATCAATGCTGCTTTTCTGAAATTTCTCAGAGTTTCATGCTGCATCTCTTGAATTTTGGTGAGGCCGTGGCAATGGGAACACACACACCAGAAAAAATGTTTCGGTTACTTGACATGTATGAGGTTTTGGAGCATCTTGCTGTGGATGTAGATATTTTGTTCTTTGAAGAAGTTGGTTCTTTTGTTAGGGGAGAGTTTCACAAGCTTCGAAGGAGCTTTGGTGAATCTGTTAAGTCTACATTTGTAGCATTCAGAAATGCTATTGCATCCAACCACTCAAAGACACCTTTTCCTCAAGGGGGTGTTCACCATGTTACCAAATATGTCATGAATTACATCATGACACTAGGTGAATATGGTGACACCCTTAATCTCCTTCTTGTTGATGAAAGTTCAATTGATCCTGCAGGCAACAACAACAACAAACCTGACTTACCATGTCTCTCATTGTGTCCAACGGCTTGTCAATTTCGCTCAATCACCGCAACTCTAGAATCCAACTTGAGCAACAAGTCCAAGTTATACAAAGACAAGGCCTTGCAACATGTTTTCATGATGAACAACATTCATTACATGGTGCAAAAAGTTAAGTGTTCTGGCCTAAGTCATTTCTTTGGCGATCGCTGGCTTCGCCAGCACACTGCGATGTACCAGCGCGATGCACGGTGTTATGAGATGGTCTCTTGGGGATCATTGCTATCCATGCTCAAGGAAGATAGTGTGTCAAATTGTGTCTCACGGAGAACTCTTGAGAAAAAGTGCAAAGAGTTCTGCACTGCTTTTGGTGAAGTTTACAGGGTTCAGACAGAGTGGTTCATCTCAGATCTTCTACTTCGCGAGGATCTACAAATTTCAGTGTCTCAGAAAGTTGTTCCTGCATACCGCACATACACTGGGAAAAACTCATATAACATTGCTGAGAAGTATATCAAGTACAGTGTAGATGATCTACAAAGTTATATTTTGGACCTTTTTCAAGGGTCACCAAAATCTTTGCACAAGTGA 2433 0.4057 MKEVMIKWKPDFFEVHTQFVKTSTFWRMSIYEPVYIQEARGQLGGIWVLRRNDSPYSFTTYDVHPQCISVLIEFRRQSWLCLGVYASPRAEQRGSEFDQNRATIFAQNIDDCRLLCLDHIVGTKSQIDWVQTLRFKSTYCSFEDQKAYSSFLQATTFLTFSCLKQFCVDFFLLFTFFAEMEENKSVISTCEQDQHVVAAAQHILKALAASKTVSEDLRKTLLDLETQLSSISIVNERKRTGIKQFERQLKCVEDKVMKWETNPSSNESCEYLKVVGEIQTLIQSLENFSVNEKGKPKELLRRANEILQVAMPSLEKELVHILVQHKQYFEPEYMSFHSNRMDIVYDESFRLVEEEQINEASRSSSGASRQSEASTIDLVNPTVLQHLKSIASFMFGSKYHQEFCQVFVTSRRDALAEYLVILEMEKLRIEDVIKLEWHCLNNEIKKWIRAMKIIVRVYLVSEKRLCEQILGDFGSFYQCCFSEISQSFMLHLLNFGEAVAMGTHTPEKMFRLLDMYEVLEHLAVDVDILFFEEVGSFVRGEFHKLRRSFGESVKSTFVAFRNAIASNHSKTPFPQGGVHHVTKYVMNYIMTLGEYGDTLNLLLVDESSIDPAGNNNNKPDLPCLSLCPTACQFRSITATLESNLSNKSKLYKDKALQHVFMMNNIHYMVQKVKCSGLSHFFGDRWLRQHTAMYQRDARCYEMVSWGSLLSMLKEDSVSNCVSRRTLEKKCKEFCTAFGEVYRVQTEWFISDLLLREDLQISVSQKVVPAYRTYTGKNSYNIAEKYIKYSVDDLQSYILDLFQGSPKSLHK 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01827 810 Gene3D Exocyst complex component Exo70 246 810 - -
Gma06g01827 810 PANTHER EXOCYST COMPLEX PROTEIN EXO70 202 807 IPR004140 GO:0000145|GO:0006887
Gma06g01827 810 PANTHER EXOCYST COMPLEX COMPONENT EXO70E2 202 807 - -
Gma06g01827 810 Coils Coil 235 262 - -
Gma06g01827 810 SUPERFAMILY Cullin repeat-like 257 801 IPR016159 -
Gma06g01827 810 Pfam Exo70 exocyst complex subunit 445 798 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01827 Gma-Chr6 19389692 19393826 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01827 180 802 EXO70 exocyst subunit family AT5G61010 42.155 2.68e-170 504
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01827 K07195 - gmx:100803510 1248.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01827 06 19389692 19393826 Gma06g01827 06 19389692 19393826 ECH