Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01824 ATGTTGTTGCTCTTCTTTCTGGATGCTCGGCTGGTGGTCTGGCTACTATTATACACTGATGAATTCAGAGGTTTTTTCCCAGAGACTACCAAAGTGAAGTGTCTTAGTGATGCAGGATTATTTCTTGATGCGATTGATGTCTCCTGGGGACATACCATCAAGAATTTATTCAGTGGTGTTGTAAGGCTACAGGGAGTGCAAAAGAATCTGCCGCACTTTTGTACTAATCACCTTGATCCCACTTCGTGCTTCTTCCCTCAGAATTTGATTGCCGGTATTAGAACCCCACTATTCATTCTTAATACTGCCTATGACTCATGGCAGGTCCAAACAAGCTTAGCTCCTTCATCAGCAGATCCCCATGGCTTTTGGCATGATTTTAGATTAAATCATGGTAAATGTACTTCTTCACAAATCCAATATTTGCAAGGTGGTTTGACATATGAGAAATAG 453 0.4128 MLLLFFLDARLVVWLLLYTDEFRGFFPETTKVKCLSDAGLFLDAIDVSWGHTIKNLFSGVVRLQGVQKNLPHFCTNHLDPTSCFFPQNLIAGIRTPLFILNTAYDSWQVQTSLAPSSADPHGFWHDFRLNHGKCTSSQIQYLQGGLTYEK 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01824 150 PANTHER PECTIN ACETYLESTERASE 16 144 - -
Gma06g01824 150 Pfam Pectinacetylesterase 16 144 IPR004963 GO:0016787
Gma06g01824 150 PANTHER NOTUM-RELATED 16 144 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01824 Gma-Chr6 19321470 19323109 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01824 15 144 Carbohydrate Esterase AT5G26670 68.462 4.95e-66 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01824 K19882 - gmx:100793403 260.766