Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01788 ATGGATAATAATAACAACAACTCCGGGTTTGTTCCGAATAATGATACTGATGATGACTGTACATTTCTCCAAACCTTGTTGGAAATGGACCCCCAACATTTCTATTTACCCACTGAAGAATTCGATTCACTGTCCCAACAACAGCAACAAAAAAATGATCCTTTTGGCGTTGAAAAGGGTAATAAAGTTTCCTTCCTGCAGGGAAATAATAATAACGATTTTCCCATTGGAGAAGGAGTAGTTCCTGATGTTGTTGATGTGGAGGAGGAAGAGGGTCCACCGAGGGGGGCGGGTAAGGAACTGATCCCCGAAGGCCAAGGTGATCGATTCTTCATACATGGCGATGATATTTTTTTCTTTGGAGAAGGAGGAGTTGGTAATAACGTGGATCCCCCACAAGAGAATCAAACTCAGCCACCAAATAACCAAGATGTGAGGTCACTTTGTCCTTGGCCCCCACCACCAGAGCCATTCTCTTGCAGTTGCTGTGAAGTTCTTAGACAAATAAATTACACCAATGGTGTTAGGTTTGACAAGCTTGAGATTCATGGAACAGTCGGGGTGATTAACCACGCAATATGCCACGTTGAGGATAAGACATCGAATCGTCCTCCAAGGGACACTTATCAAATAATCGATTTCTGCAATAAAAACACAGAAGAAATAAGGAATTTCCTAAATGTTTACTGTAAAGAGAGGATTGAAGCAGGGTTCATTCCCATAGAAGATCCGTCGATGTCTGCCTTTTATGATGCCCTCTGCACTGGAATGGATTGGACTGATGTTTCCAATGACGTAGACGATGATTTGGGTCCACCAAATGGCACGGAGCAAGAGTCGGAGTCTGAACCTGAGGCTGGGAATGGAAGAAGGGCTTCAACTTCTAGGCCTAGACGACGTGATATGGCAGTTCAGAGGCAGAGAGTACCAAGGATGACATTGAGTGATTTGAGCGGTGTCTTCCATTTGACTATTAGTGCTGCAGCGGTTAAACTGGACGTAAGTAACTCTACCGTGAAGAGTATATGCCGCAGAGGAAAATTGAAAAGATGGCCCCAAAGAAAGGTGCAAAGCCTTGCCAAGAAGGTCAGAGTACTCGTTAGAGCATTGAATTCGCCTGATCCAGGGGTGAAGCGAAGAACTCAAGATGAAATTCGAAGACTTCAGAAAGAAATAATTGAGAATTGTGGTGGAATTACCCCAACCGGAATACCGATGCTCCAATTCGATGAAGAATGA 1239 0.4391 MDNNNNNSGFVPNNDTDDDCTFLQTLLEMDPQHFYLPTEEFDSLSQQQQQKNDPFGVEKGNKVSFLQGNNNNDFPIGEGVVPDVVDVEEEEGPPRGAGKELIPEGQGDRFFIHGDDIFFFGEGGVGNNVDPPQENQTQPPNNQDVRSLCPWPPPPEPFSCSCCEVLRQINYTNGVRFDKLEIHGTVGVINHAICHVEDKTSNRPPRDTYQIIDFCNKNTEEIRNFLNVYCKERIEAGFIPIEDPSMSAFYDALCTGMDWTDVSNDVDDDLGPPNGTEQESESEPEAGNGRRASTSRPRRRDMAVQRQRVPRMTLSDLSGVFHLTISAAAVKLDVSNSTVKSICRRGKLKRWPQRKVQSLAKKVRVLVRALNSPDPGVKRRTQDEIRRLQKEIIENCGGITPTGIPMLQFDEE 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01788 412 PANTHER PROTEIN RKD4 5 397 IPR044607 GO:0003700
Gma06g01788 412 MobiDBLite consensus disorder prediction 264 309 - -
Gma06g01788 412 MobiDBLite consensus disorder prediction 292 306 - -
Gma06g01788 412 ProSiteProfiles RWP-RK domain profile. 299 380 IPR003035 -
Gma06g01788 412 MobiDBLite consensus disorder prediction 41 55 - -
Gma06g01788 412 PANTHER RWP-RK DOMAIN PROTEIN 5 397 - -
Gma06g01788 412 MobiDBLite consensus disorder prediction 41 78 - -
Gma06g01788 412 MobiDBLite consensus disorder prediction 129 144 - -
Gma06g01788 412 Pfam RWP-RK domain 312 359 IPR003035 -
Gma06g01788 412 MobiDBLite consensus disorder prediction 123 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01788 Gma-Chr6 18499920 18501804 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Gma06g01788 RWP-RK 7.7e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01788 - - gmx:100784971 788.104