Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01773 ATGGCTCTCTTCCGAAGGTTCTTTTACTGGAAACCGCCGGATCACCTCCTCGAGATCTCCGATAGACTCTATGTTTTTGATTGCTGCTTCTCCAAGAATGTGTTGGAGGAAGAGGAGTACAAGGCTTATATTGGGGGCATTGTGGCTCAACTACAGGATCACTATCCGGATGCTTCTTTCATGGTGATCAATTTCAGAGAAGGAGATAAGCGCAGTCGAATTTCAGACATTATGTCTCAGTATGAGATGACAGTTATGGAGTACCCTCAGAAATACGAGAGTTGTCCACTTCTTCCTTTAGAGATGATTCACCATTTCCTTCGGTCAAGCGAGAGCTGGCTGTCTCTGGAGGGGCAACAAAATGTGCTTTTGATGCACTGTGAAAGGGGTGGTTGGCCTGTGCTCGCATTTATGCTAGCTGGTCTTCTATTGTACAGGAAACAGTACAGTGGGGAGCACAAGACTCTTGAAATGGTGTACAAGCAAGCACCTAGAGAACTTCTCCACCTTTTATCTCCTTTAAATTCGCAACCTTCTCATTTGAGATATCTTCAGTACATTTCCAGGAGGCATTTGGGTTCTATGTGGCCTCCTCCAGATACACCCTTATATTTGGATTGCCTCATTCTTAGAGTCCTTCCATTGTTTGATGGTGGAAAAGGTTGCAGGCCAGTTGTGCGTGTCTATGGTCCAGACCCTTCAAAACCTGCCAACAGAGGTTCTAAGCTTCTTTTCTCGACCTCAAGGACCCAAAATCTTGTTCGCCACTACCAGCAGGAAGAATGTATGCTCGTGAAAATTGACATCCATTGTCGTGTTCAAGGAGATGTGGTTCTTGAGTGCATACATTTAAGTGAAGATCTTGTTCGTGAGGAGATGATGTTTAGAGTCATGTTTCATACTGCATTTGTACGGTCAAATATATTGATGCTGAGCCGTGATGAAATTGATATTCTGTGGGATGCAAAGGATCAGTTCCCTAAGGACTTCAGATTTGAGGTGCTTTTTTTGGATGCTGATGCTGTGATACCTAATCTAACCACATTCAATGCGAGTGAATATGCAAATGACACTGAATGTGCTTCACCTGAGGCTGAGGAATTCTATGAAGCGGAAGAGATCTTCAGCAATATAATTGATGCTCAAGAAGGTAAGGGGGATTACGATTCTCCAATGGTTCTTGATGATGGAAGTCATAAAGAGCTCTGGAAAGAGTATTCAGATCCTCATACTTTTCAGGATTTCATGTTAGATGATGGGATTCACCAACAGGTTGATAATGTGAAGTACAAGCTTGACGAGAGGGTGGTTTCAGATACTCATGCTTTGAAAGATATTGGCGTGGATTATGGAGTCACTTTTATGACAAAGGAAGTCAGTGTGGATGTGCATGATGAGTTGTCAGGTATGCAGAACAAGTGTGATGAAGATAACAATGAAAAGAAACAACTTCCTTCAAGCTCAAAGCCAGTGGGAGATACAGTTGTACCAAAGCAAAAAACTAAAGAACAAGAACCACATGGTTTTCAGGCAAAACAAGCAAAACCCAATGCAACAACTAGGTGGATTCCTTCTAATAAGGGTTCTTATCAAGATTCAATGCACGTCTCATATCCACCATCAAGAAATAATAATTCACCAGCTAACCTTTCAAATGTTACCTCAGCAAAGGAGAAGATTACTGATGCCAAAGGAAAATCTATTTCTGGTTCTTATGTCTCTGAAGTAATTGTTTCTATGGACATGAGAAATGACCTGAAAAGCTGTATAGGGGATAATTCAAAATCTTCAGACAGCATAGCTGAAATAGACTCAAACTCTCCCCTACCACCATTACTGTCAGTCAAAGAGACATCTCTTCAATCAGCTACTCAAACACCACAACAGAGCTACAATCAAATGTTACAACTTCATCCTCCACCTCCTCCTCCACCTCCATTTTTTGGGCAGAATAGAGGGAGCTTCATAACTCCTACCCAATGGACATCTGTTTATTCATCCATTGCCATTGTTGGACAAAATAATGGTGCTTTAGCTCCTCCTCCCTCAGCTCCTTCCATTGCAAGTGGTGCAATTACATCAAAAGTTTCTGAATTAATTGATGCAGTTTCCGTTCCCCATCCTCCACCATCACTACCACCACCACCACCTCCTCCTCCTCCTATGTTGTCTACAATTGGAGCTCCACTGCCTCCTTCCTCATTACCTCCAACATCATTTAAAGCTCCACCGCCACATCCAccttcacctcctttaagtaaatctacaccactgccttctcctcctttaagtactgctccaccacCACCACCTCTTCCTGCATCAAGTGGAGCCCCACCTCCACCGCCACCTCCTTCATTGTCTAGAGCCCCACCTCCCCCGCCTCCACCAACTCATAGACCACCACCTTCAATGCATGGAGGCACACCTCCTCCACCACCTCCAAGTGGTCGAGGCCCACCTCCTACTGGATATCGGGCCCCTGCCGCTCCTGCTCCTTTTGGACCTCTAGGTGGGGCTCCTTCTCCGTCGCCACTTGGAACTGATCCAAGAGGGAGAGGGCGTGGACTTACACGTCCTACGGGAGCTGGTGCTATGGCAGCTCGGCGGTCCTCCTTAAAGCCTCTGCATTGGAGTAAGGTAACAAGGGCATTGCAAGGAAGTTTATGGGATGAATTACAAAGACGTGGAGACCCTCAAATAACACAAGAGTTTGACGTTTCAGAGATAGAAAAGCTTTTTTCTGCAAATGTTCCAAAACCTGCTGATTCAGATGGTAAATCTGGTGGGCGACGTAAATCTGTTGGATCCAAAACTGACAAAATCCACTTGATTGACCTAAGGAGGGCCAATAATACTGAAATTATGCTCACAAAGGTTAAGATGCCACTTCCTGATATTATGGCTGCAGTACTGGCTATGGATGATTCAGTGTTAGATGTTGATCAGGTGGAAAATCTCATTAAATTTTGTCCTACCAAAGAGGAAATAGAGCTTTTAAAGGGATACACCGGTGATAAGGAGAATTTGGGGAAGTGTGAAAAGTATTTTTTGGAGGTGATGAAAGTGCCAAGAGTGGAGTCAAAATTCAGAGTTTTCTCTTTCAAGATTCAGTTTAGGACTCAGATTACAGAGTTTAAGAAGAGCTTAAACACAGTGAACTCTGCCTGTGAAGAGGTCCGAAACTCATTCAAACTGAAGGAGATTATGAAGAAAATTCTTTATTTGGGTAATACATTGAATCAAGGAACAGCAAGGGGATCTGCTGTTGGATTCAAGTTAGATAGTCTTCTAAAACTAACTGAAACTCGTGCTTCAAACAGTAAAATGACACTCATGCATTTTCTTTGCAAGGTAATAGTCTTAGTTGCATTAAATGAAGATTTTACTGGTGGTTTACCTTTCTGTTTCTTTCTATTTGAACTCCAGGTCTTAGCTGAAAGGTTTCCCGGACTCCTTGATTTTCACCATGACCTTGTTAGCCTGGAAGCAGCCACTAAGATACAATTGAAATCATTAGCAGAAGAAATGCAGGCAATCATCAGGGGATTAGAAAAGGTTAAACAGGAGCTTGCTGCATCTAAAAATGATGGCCCTGTGTCTGACATTTTTCGTAAGACATTGAAGGAATTCATTGCTGTTGCAGAGTCGGAGGTGGTATCTGTAACAAACTTATATTCTGTGGTGGGTAGAAATGCAGATGCACTTGCCCTATATTTTGGTGAGGATCCTGCCCGTTGTCCTTTTGAGCAAGTTACTGTAACTCTCTTAAATTTTACAAGGTTGTTTCTGAAAGCACATGAAGAGAATTCCAAACAAGCAGAGTTAGAGAAAAAGAAAGCGGAGAAAGAGGCTGAAATGGAGAAGGCTAAAGGCATTAACTTGATAAGGAAGAGTGGAAAATATGAAGGAGAAGAAAGCGGAGAAAGAGGTTGA 3936 0.422 MALFRRFFYWKPPDHLLEISDRLYVFDCCFSKNVLEEEEYKAYIGGIVAQLQDHYPDASFMVINFREGDKRSRISDIMSQYEMTVMEYPQKYESCPLLPLEMIHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYSGEHKTLEMVYKQAPRELLHLLSPLNSQPSHLRYLQYISRRHLGSMWPPPDTPLYLDCLILRVLPLFDGGKGCRPVVRVYGPDPSKPANRGSKLLFSTSRTQNLVRHYQQEECMLVKIDIHCRVQGDVVLECIHLSEDLVREEMMFRVMFHTAFVRSNILMLSRDEIDILWDAKDQFPKDFRFEVLFLDADAVIPNLTTFNASEYANDTECASPEAEEFYEAEEIFSNIIDAQEGKGDYDSPMVLDDGSHKELWKEYSDPHTFQDFMLDDGIHQQVDNVKYKLDERVVSDTHALKDIGVDYGVTFMTKEVSVDVHDELSGMQNKCDEDNNEKKQLPSSSKPVGDTVVPKQKTKEQEPHGFQAKQAKPNATTRWIPSNKGSYQDSMHVSYPPSRNNNSPANLSNVTSAKEKITDAKGKSISGSYVSEVIVSMDMRNDLKSCIGDNSKSSDSIAEIDSNSPLPPLLSVKETSLQSATQTPQQSYNQMLQLHPPPPPPPPFFGQNRGSFITPTQWTSVYSSIAIVGQNNGALAPPPSAPSIASGAITSKVSELIDAVSVPHPPPSLPPPPPPPPPMLSTIGAPLPPSSLPPTSFKAPPPHPPSPPLSKSTPLPSPPLSTAPPPPPLPASSGAPPPPPPPSLSRAPPPPPPPTHRPPPSMHGGTPPPPPPSGRGPPPTGYRAPAAPAPFGPLGGAPSPSPLGTDPRGRGRGLTRPTGAGAMAARRSSLKPLHWSKVTRALQGSLWDELQRRGDPQITQEFDVSEIEKLFSANVPKPADSDGKSGGRRKSVGSKTDKIHLIDLRRANNTEIMLTKVKMPLPDIMAAVLAMDDSVLDVDQVENLIKFCPTKEEIELLKGYTGDKENLGKCEKYFLEVMKVPRVESKFRVFSFKIQFRTQITEFKKSLNTVNSACEEVRNSFKLKEIMKKILYLGNTLNQGTARGSAVGFKLDSLLKLTETRASNSKMTLMHFLCKVIVLVALNEDFTGGLPFCFFLFELQVLAERFPGLLDFHHDLVSLEAATKIQLKSLAEEMQAIIRGLEKVKQELAASKNDGPVSDIFRKTLKEFIAVAESEVVSVTNLYSVVGRNADALALYFGEDPARCPFEQVTVTLLNFTRLFLKAHEENSKQAELEKKKAEKEAEMEKAKGINLIRKSGKYEGEESGERG 1311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01773 1311 Gene3D Protein tyrosine phosphatase superfamily 15 202 IPR029021 -
Gma06g01773 1311 Gene3D Formin, FH2 domain 864 1275 IPR042201 -
Gma06g01773 1311 MobiDBLite consensus disorder prediction 700 871 - -
Gma06g01773 1311 Gene3D - 203 336 - -
Gma06g01773 1311 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 336 IPR035892 -
Gma06g01773 1311 MobiDBLite consensus disorder prediction 513 534 - -
Gma06g01773 1311 MobiDBLite consensus disorder prediction 469 483 - -
Gma06g01773 1311 SUPERFAMILY Formin homology 2 domain (FH2 domain) 940 1291 - -
Gma06g01773 1311 SMART PTEN_C2_2 198 338 IPR014020 -
Gma06g01773 1311 SMART it6_source 863 1291 IPR015425 -
Gma06g01773 1311 CDD PTP_PTEN-like 16 190 - -
Gma06g01773 1311 MobiDBLite consensus disorder prediction 589 649 - -
Gma06g01773 1311 MobiDBLite consensus disorder prediction 611 635 - -
Gma06g01773 1311 MobiDBLite consensus disorder prediction 706 840 - -
Gma06g01773 1311 MobiDBLite consensus disorder prediction 589 604 - -
Gma06g01773 1311 Pfam Formin Homology 2 Domain 870 1263 IPR015425 -
Gma06g01773 1311 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 13 188 IPR029021 -
Gma06g01773 1311 MobiDBLite consensus disorder prediction 469 534 - -
Gma06g01773 1311 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Gma06g01773 1311 Pfam C2 domain of PTEN tumour-suppressor protein 199 336 IPR014020 -
Gma06g01773 1311 PANTHER FORMIN-J 1 1293 - -
Gma06g01773 1311 Coils Coil 1264 1293 - -
Gma06g01773 1311 ProSiteProfiles Formin homology-2 (FH2) domain profile. 863 1289 IPR015425 -
Gma06g01773 1311 MobiDBLite consensus disorder prediction 916 937 - -
Gma06g01773 1311 Coils Coil 1170 1194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01773 Gma-Chr6 18170591 18184068 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01773 1 623 FH2 protein (formin) Gene Family AT5G07740 56.324 0.0 733
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01773 - - gmx:100779085 1414.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01773 06 18170591 18184068 Gma06g01773 06 18170591 18184068 ECH