Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01769 ATGAGGGGTGGGAGGAGGGGTATGATAAAGCTTCAGTTTAGCAAGATCTACTCTTTTGCTTGTGGTAAAACAATCTTCAAGAGGGAACATTCAAGGATTGGGGGACATGGTCATTCCAGGGTGGTTTTCTGCAATGAACCAGATAGATTTGAGGGAGGGTTTTTTAATTATGCTGATAATTCTGTTAGGTCCACAAAGTATACTGTTGCCACTTTCTTGCCTAAGTCACTGTTTGAGCAGTTTAGGAGGGTGGCTAATTTCTATTTCTTGGTGGCTGGAATCTTGGCCTTCACAAAGCTTACTCCTTATACTGCTGTCAGTGCTATCCTTCCTCTGTCTATCATCATTGGGGCAACTATGGTGAAAGAGGGTATCGAAGATTGGCGCAGGAAAAAGCAGGATACTGAGGTGAACAATAGAAGAGTTATATTGCTTAAAGGTGATGGCAATTTCGAATATACTGAATGGAAGAATCTGAGAGTAGGGAATATAGTGAAGATAATGAAGGATGAATTCTTCCCTGCTGACCTCCTACTGCTTTCCTCCAGTTATGAGGATGCAGTCTGCTATGTTGAGACCATGAACTTGGATGGTGAGACAAATTTGAAGTTAAAACAAGGGCTGGATGTAACTTCTTCCTTACAGGAGGACTTTAAATTCCGTGATTTTAGAGCTGTCATCAAATGTGAAGACCCAAATGCAAATTTGTATTCATTTGTTGGGAGCATGGATTTTGGAGAGCAAAAATATCCTCTTTCTGCTCAGCAACTTCTTCTGAGAGACTCTAAACTTCGTAATACAGACTATGTGTTTGGAGCAGTCATCTTTACTGGTCATGACACAAAGGTTATCCAAAACTCCACTGATCCCCCTTCAAAAAGAAGCAAAATTGAGAAGAAGATGGATAAGGTTATATACTTCTTGTTTTGTGTTTTATTTCTAATTGCATTTCTTGGATCTATTCTCTTTGGCTTTGCAACCAAAGGTGACCTTGACAATGGGTTAATGAAAAGATGGTATCTCAGACCAGATAGTTCCACAATTTTCTTTGATCCAAAAAGAGCAGCTGCAGCTGCTATATTTCATTTTTTAACAGCCTTAATGTTGTACAACTTCTTCATTCCTATCTCCTTGTATTTCTCAATAGAGATGGTCAAAGTTCTTCAGAGCATCTTCATCAATCAAGATATCCACATGTATTATGAAGAAACTGACAAACCAGCTCTAGCCCGTACTTCAAACTTGAATGAGGAACTTGGCCAAGTTGACACAATACTTTCTGATAAAACTGGAACTCTGACCTGCAACTCAATGGAGTTCATCAAATGTTCTGTTGCTGGGGTAGCATATGGCCGCGGTGTGACAGAAGTTGAGCAAGCCATGGGTAAAAGTAATGGTTTACCTATTTTTCATGAGCATATTAATGGATTAGAATCAAAATTAAATGAAATCAGGGACTCTCCTGATAGAAAAGAACCTATCAAAGGTTTTAACTTTACAGATGAAAGGATAATGAATGGAAACTGGGTTAATGAGCCTTATGCAGATGTTATACAGAATTTTTTTCGCTTATTGGCAATTTGTCATACTGCCATACCTGAAGTGGATGAAGAAACAGGAAAAGTCTCATATGAAGCTGAATCTCCAGATGAAGCAGCATTTGTAATTGCTGCAAGAGAAGTTGGTTTTAAATTCTACAAAAGGACTCAGACTTGTTTGTCAATATATGAGTTGGATCCAGCTTCTGGCAATGAAGTTGAAAGCAGGACGTACAAGCTTCTTAATGTTTTAGAATTCAATAGCTCGAGGAAGCGAATGTCGGTGATAGTGAAAGATGAAGAGGGGAGAATTTTTCTACTCTGTAAAGGTGCTGACAGTGTCATGTTTGAAAGGCTTGCCAAGAATGGGAGGAAGTTTGAAGAGAAAACTCTGGAACATGTGCGTGAATATGCTGATGCAGGTCTAAGGACCCTAGTACTTGCCTTTTGCGAACTTGATGAAGAAGAATACAAGGAGTTTGATGATAAATTTTCTGAAGTAAAAAATTCAGTTGCCGCAGATCAGGAAACCCTGATTGAAGAAGTATCGGATAAGATAGAGAGGAATCTAATCCTTCTGGGTGCCACTGCTGTCGAGGACAAGCTCCAAAATGGGGTAGTTCCTGATTGTATCGACAAGCTTGCCCAAGCTAAGATTAAGATTTGGGTTTTGACTGGGGATAAAATGGAGACTGCCATCAATATTGGTTTCTCTTGTCGCTTGCTAAGACAAGGAATGAAACAGATTATAATTCATTTGGAGATTCCAGAAATTCAAGCATTAGAAAAGGCTGGAGACAAGATGGCTATTGCCAAGGCATCAAGGGAAAGTGTGCATCATCAGATATCTGAAGCTGCTCAACTGCTTTCTGCATCCAGAGGGACCTGCCAGACATTTGCTCTGATCATTGATGGAAAATCACTTACTTATGCTTTAGAGGATAATATGAAGAACATGTTTCTAGAGCTTACGAGTCATTGTGCGTCTGTTATCTGCTGTCGCTCATCGCCAAAGCAGAAGGCTCTGGTTACTAGACTGGTCAAATCTGGAACTGGTAAAACAACATTAGCTATTGGTGATGGAGCTAATGATGTTGGAATGCTTCAAGAAGCAGATGTAGGGATTGGAATCAGTGGTGTCGAAGGAATGCAGGCTGTTATGTCTAGTGATATTGCAATTGCACAGTTCCGGTATTTGGAAAGATTACTTCTTGTACATGGACATTGGTGTTACCGGAGGATGTCATCGATGATATGCTATTTTTTCTACAAGAATATCACATTTGGCTTTACTCTATTCTTGTATGAGGTGTATGCATCATTCTCTGGACAGCCTGCATATAATGACTGGTTTTTGTCTCTCTATAGTGTCTTCTTTTCATCACTTCCTGTGATTGCCCTTGGGGTCCTTGACCAGGATGTATCTGCCAGGTACTGCCTGAAGTTTCCAATCTTATACCAAGAAGGTGTGCAAAATATCCTCTTCAGCTGGCGTCTAATACTTAGCTGGATGCTTAATGGATTTATTAGTGCCACAATGATATTCTTCTTCTGCACAAAAGCAATTTTGCCACAGGCCTTTGATGAGGAGGGAAGAACTGCTGGAAGGGATATGCTGGCAGTGACGATGTATACTTGCGTGGTTTGGGTTGTGAACTTGCAGATGGCGCTTGCTATACGTTACTTCACCTTGATACAACATATTTTCATCTGGGGTTCCATTGCTTACTGGTATCTTTTCCTCATGGTATATGGAGCAATGCCTCCAAACATTTCTACAAATGTTTACAAAGTCTTCATCGAAACTCTCGCCCCATCTCCTTCCTTTTGGGTTGTGACATTCTTTGTGGCGATCTCAACACTCATACCATACATTTCGTGCTCGGTAATTCAGATGTGGTTCTTCCCCATGTATCACCAAATGGTGCAGTGGATAAGGTATGAGAGGAAGACAAATGTTCCTGAGTAA 3507 0.4032 MRGGRRGMIKLQFSKIYSFACGKTIFKREHSRIGGHGHSRVVFCNEPDRFEGGFFNYADNSVRSTKYTVATFLPKSLFEQFRRVANFYFLVAGILAFTKLTPYTAVSAILPLSIIIGATMVKEGIEDWRRKKQDTEVNNRRVILLKGDGNFEYTEWKNLRVGNIVKIMKDEFFPADLLLLSSSYEDAVCYVETMNLDGETNLKLKQGLDVTSSLQEDFKFRDFRAVIKCEDPNANLYSFVGSMDFGEQKYPLSAQQLLLRDSKLRNTDYVFGAVIFTGHDTKVIQNSTDPPSKRSKIEKKMDKVIYFLFCVLFLIAFLGSILFGFATKGDLDNGLMKRWYLRPDSSTIFFDPKRAAAAAIFHFLTALMLYNFFIPISLYFSIEMVKVLQSIFINQDIHMYYEETDKPALARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGVAYGRGVTEVEQAMGKSNGLPIFHEHINGLESKLNEIRDSPDRKEPIKGFNFTDERIMNGNWVNEPYADVIQNFFRLLAICHTAIPEVDEETGKVSYEAESPDEAAFVIAAREVGFKFYKRTQTCLSIYELDPASGNEVESRTYKLLNVLEFNSSRKRMSVIVKDEEGRIFLLCKGADSVMFERLAKNGRKFEEKTLEHVREYADAGLRTLVLAFCELDEEEYKEFDDKFSEVKNSVAADQETLIEEVSDKIERNLILLGATAVEDKLQNGVVPDCIDKLAQAKIKIWVLTGDKMETAINIGFSCRLLRQGMKQIIIHLEIPEIQALEKAGDKMAIAKASRESVHHQISEAAQLLSASRGTCQTFALIIDGKSLTYALEDNMKNMFLELTSHCASVICCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADVGIGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRMSSMICYFFYKNITFGFTLFLYEVYASFSGQPAYNDWFLSLYSVFFSSLPVIALGVLDQDVSARYCLKFPILYQEGVQNILFSWRLILSWMLNGFISATMIFFFCTKAILPQAFDEEGRTAGRDMLAVTMYTCVVWVVNLQMALAIRYFTLIQHIFIWGSIAYWYLFLMVYGAMPPNISTNVYKVFIETLAPSPSFWVVTFFVAISTLIPYISCSVIQMWFFPMYHQMVQWIRYERKTNVPE 1168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01769 1168 SFLD p-type atpase 408 922 IPR044492 -
Gma06g01769 1168 Pfam Cation transport ATPase (P-type) 537 632 - -
Gma06g01769 1168 Gene3D - 548 705 IPR023299 GO:0000166
Gma06g01769 1168 ProSitePatterns E1-E2 ATPases phosphorylation site. 428 434 IPR018303 -
Gma06g01769 1168 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 7 1168 - -
Gma06g01769 1168 CDD P-type_ATPase_APLT_Dnf-like 59 1031 - -
Gma06g01769 1168 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 57 1156 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Gma06g01769 1168 Gene3D - 112 289 - -
Gma06g01769 1168 SUPERFAMILY Calcium ATPase, transduction domain A 143 285 IPR008250 -
Gma06g01769 1168 Pfam Phospholipid-translocating ATPase N-terminal 43 108 IPR032631 -
Gma06g01769 1168 PRINTS P-type cation-transporting ATPase superfamily signature 426 440 - -
Gma06g01769 1168 PRINTS P-type cation-transporting ATPase superfamily signature 871 890 - -
Gma06g01769 1168 Gene3D - 706 911 IPR023214 -
Gma06g01769 1168 Pfam Phospholipid-translocating P-type ATPase C-terminal 899 1149 IPR032630 -
Gma06g01769 1168 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 7 1168 - -
Gma06g01769 1168 SUPERFAMILY HAD-like 421 926 IPR036412 -
Gma06g01769 1168 SFLD Haloacid Dehalogenase 408 922 - -
Gma06g01769 1168 SUPERFAMILY Calcium ATPase, transmembrane domain M 57 1149 IPR023298 -
Gma06g01769 1168 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 844 953 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma06g01769 1168 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 498 707 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01769 Gma-Chr6 18045654 18054180 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01769 3 1168 Primary Pumps ATPases AT1G68710 71.584 0.0 1789
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01769 K01530 - gmx:100776955 2261.49