Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01746 ATGGCAGAAGAAGCAGCACCGAAAGTCGTCGATCCCAACACCGTCGTCGCCGCCGCCGCCGCCGCCGCCGTGGACATGGACGTCGAGAACATCGAGGCCGGCGACAACGGCGCCGAGCCGAACCAGAAGCGCGCCAGGGAGGAAGAGGAGCCCCTGGTCGACGACGACGACGTTTTGAAGAAGCAGAAGGTGGCCGAGGAAAAGGAACAGTCCGTAGAGGAACAGCGGCTGGAGAAGCGCGATGAAAAAGaagaaaaggaagcagaaaaagaagaggaagagaaGGAAGCAAGTGGTTCCGTGAACTTGGGATTCAAGAGCTTCGTTTCTTCCTCGGAGATGTTTCATTACTTCTACAACTTTCTCCATACCTGGCCTCAATATCTCAATGTTAACAAGTATGAACATCTGATGTTGTTGGAGTTGCTTAAGAACGGCCATGCAGAGCCAGATAAAAAGATTGGTGGAGGGGTTCGGGCTTTCCAAGTCCGCAAGCATCCTACCTTCAAAAGCAGGTGCTTTTTCCTCATCAGGGAGGATGACTCTGCTGATGATTTTAGCTTCAGGAAGTGTGTGGATCACATTCTTCCCTTGCCGGAAGAGATGCATTTGAAATTTGATGCGAACAAGGCATTGGGTGGTGGTGGTGGTGGAGGAGGAAAGCATTATGGAGGAGGAAAGGGTGGCAGAGGGGGGAGGGGTGGACGAGGAGGAGTGTACTATGCTGTCAACTTGGACATGGAGAATCAGCAACTAACGTTTTGGAAGTCCAATTATGATATTGATGACTATTATCCATTTGCACCTACGAGCCAATTTTCTTCATATGATTATTGCGGCTGGGGTAGTGCCGCTGATGGGTATCATTGGCCACATGAATTTCCTTTGCAAGATAGCTATCTTGATGCTATCCCTTTTATGAAGTTTTATTATCCTCATGACATTTTGTATGAAACTACTCTTCCCATTGAACCAACCTCACTAAGCATACAAGACTATGACTTTTCTGATTGGAACGAAATCGATGGTTCTGATCATAAACCTGTGTTTTCATCATGCAATGATGGAGAAAGTGTAAGTGAAATGAAGGAGGATTTGAATGCTAAGAAATGCAGAGAAGAGAAAATTAGTAGCAGTGCGAAAATGTTGTCAAGAACAACTGTTTCTCAATACTTTTACATGCCAATATCAAAAGCAGCAAGAGAGCTCAATGTGGGCCTCACACACTTGAAGAAAAGGTGTAGGGAGTTAGGAATTCAGAGGTGGCCACATAGGAAGCTGAtgagtctgcaaacccttataaagaatatacaaGAGCAAGGAGAGGCCGAGGGGCATGAAAATGATGAAAAATTAAGGGCTGCCATTGAGATGTTGAAGAGAGAAAAAAGGAAGGTGGAGGAAATGCCGGATTTGGAACTTGAGGATAATACAAGAAGGCTTAGACAAGCTTGTTTTAAGGCTAACTACAAGAAGAGGAAACTCGTGGGCATGAGGTTCATTGAACCTGAGTCTTCTCTTAGTGGTCTATCCAACAAGTATTGA 1545 0.444 MAEEAAPKVVDPNTVVAAAAAAAVDMDVENIEAGDNGAEPNQKRAREEEEPLVDDDDVLKKQKVAEEKEQSVEEQRLEKRDEKEEKEAEKEEEEKEASGSVNLGFKSFVSSSEMFHYFYNFLHTWPQYLNVNKYEHLMLLELLKNGHAEPDKKIGGGVRAFQVRKHPTFKSRCFFLIREDDSADDFSFRKCVDHILPLPEEMHLKFDANKALGGGGGGGGKHYGGGKGGRGGRGGRGGVYYAVNLDMENQQLTFWKSNYDIDDYYPFAPTSQFSSYDYCGWGSAADGYHWPHEFPLQDSYLDAIPFMKFYYPHDILYETTLPIEPTSLSIQDYDFSDWNEIDGSDHKPVFSSCNDGESVSEMKEDLNAKKCREEKISSSAKMLSRTTVSQYFYMPISKAARELNVGLTHLKKRCRELGIQRWPHRKLMSLQTLIKNIQEQGEAEGHENDEKLRAAIEMLKREKRKVEEMPDLELEDNTRRLRQACFKANYKKRKLVGMRFIEPESSLSGLSNKY 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01746 514 PANTHER - 17 231 IPR044673 -
Gma06g01746 514 PANTHER PROTEIN EMBRYO DEFECTIVE 514 17 231 - -
Gma06g01746 514 Coils Coil 449 469 - -
Gma06g01746 514 Pfam RWP-RK domain 383 430 IPR003035 -
Gma06g01746 514 MobiDBLite consensus disorder prediction 39 97 - -
Gma06g01746 514 Coils Coil 65 103 - -
Gma06g01746 514 Pfam Protein of unknown function (DUF3223) 121 192 - -
Gma06g01746 514 MobiDBLite consensus disorder prediction 30 97 - -
Gma06g01746 514 ProSiteProfiles RWP-RK domain profile. 363 451 IPR003035 -
Gma06g01746 514 Gene3D - 97 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01746 Gma-Chr6 17732144 17737605 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01746 369 498 AtRKD Transcription Factor Family AT1G18790 62.879 3.09e-53 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Gma06g01746 DUF3223 4.5e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01746 - - gmx:100815615 558.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01746 06 17732144 17737605 Gma06g01746 06 17732144 17737605 ECH