Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01741 ATGAAGAAGAGACAGGTAGTGGTGAAAAGTGTGGCCAACACTTCATCTTCAGTGATGAGAAACATAAGATATGGTGAGTGCCAGAAGAATCATGCAGCGAATATTGGAGGGTATGCTGTTGATGGTTGCAGGGAATTCATGGCTAGTACAGGGGAAGGTGCTGGTGGGGCACTTACATGTGCGGCTTGTGGCTGCCACAGGAACTTCCACAGAAGGGAAGTGAATACTGAGTCAGTGGAATTTCTCACACACCAAACGGGAATTGTTTCAATAAAGGTAGAAAAATACAACAAAATCCAAGTAGCTTTAATAGTTGGAAGTGGTGGCAACTGCACAACTCCTCTCTTTTGCCCTGTGATGTATGGGCTCTTCAGTTGTTTATTATTGTTCGAGGTGAACGAAGAATATGTTGGTATCTTGTCTTTGAGCAGACTTAATTATCACCTTGATATAAGTGTAAATTAG 465 0.4237 MKKRQVVVKSVANTSSSVMRNIRYGECQKNHAANIGGYAVDGCREFMASTGEGAGGALTCAACGCHRNFHRREVNTESVEFLTHQTGIVSIKVEKYNKIQVALIVGSGGNCTTPLFCPVMYGLFSCLLLFEVNEEYVGILSLSRLNYHLDISVN 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01741 154 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 4 79 - -
Gma06g01741 154 PANTHER MINI ZINC FINGER PROTEIN 3 4 79 - -
Gma06g01741 154 Pfam ZF-HD protein dimerisation region 22 74 IPR006456 -
Gma06g01741 154 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 24 73 IPR006456 -
Gma06g01741 154 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 23 74 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01741 Gma-Chr6 17675492 17677267 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01741 1 79 Zinc finger-homeobox gene family AT1G18835 72.840 3.60e-33 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Gma06g01741 ZF-HD_dimer 2.7e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01741 - - gmx:100785967 152.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01646 04 44689868 44693436 Gma06g01741 06 17675492 17677267 GST