Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01739 ATGGGAAGACCACCTTGCTGTGATAAAATTGGGATTAAGAAAGGGCCTTGGACTCCTGAGGAAGACATCATCTTGGTCTCTTACATTCAAGAACATGGACCCGGAAATTGGAGATCGGTTCCCAGTAACACAGGTTTGATGAGATGCAGCAAAAGCTGCAGACTCAGATGGACCAACTATCTCCGACCTGGTATCAAACGAGGCAATTTCACCGATCATGAAGAGAAAATGATAATCCACCTCCAAGCTCTTTTGGGTAACAGATGGGCTGCTATAGCTTCCTACCTTCCACAAAGGACAGACAATGACATAAAGAACTATTGGAACACCCATTTGAAGAAGAAGCTGAAGAAGATGCAAATTGGGGTGGTAGTGATGATGATAATAATGATGACAAATCAAACTCTTCTAACAATTCACAAATAA 426 0.4202 MGRPPCCDKIGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPSNTGLMRCSKSCRLRWTNYLRPGIKRGNFTDHEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLKKMQIGVVVMMIIMMTNQTLLTIHK 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01739 141 CDD SANT 69 112 IPR001005 -
Gma06g01739 141 Gene3D - 68 122 - -
Gma06g01739 141 Gene3D - 13 66 - -
Gma06g01739 141 SMART sant 13 63 IPR001005 -
Gma06g01739 141 SMART sant 66 114 IPR001005 -
Gma06g01739 141 CDD SANT 16 61 IPR001005 -
Gma06g01739 141 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Gma06g01739 141 PANTHER TRANSCRIPTION FACTOR MYB-HB-LIKE FAMILY-RELATED 1 122 - -
Gma06g01739 141 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 122 - -
Gma06g01739 141 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Gma06g01739 141 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Gma06g01739 141 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Gma06g01739 141 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Gma06g01739 141 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Gma06g01739 141 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01739 Gma-Chr6 17642011 17642899 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01739 1 119 MYB Transcription Factor Family AT5G62470 91.597 1.85e-83 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gma06g01739 Myb_DNA-binding 1.4e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01739 K09422 - gmx:100794319 263.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01739 06 17642011 17642899 Gma06g01739 06 17642011 17642899 ECH