Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01731 ATGGAGGGAGGTAGTGATGACTTCCACTACCACCACCATCTCCATAACCATAACCACCACCGACAAAACTTCCCATTCCAACTACTTGAGAAGAAAGAAGATCCCCAAGACCCTTCTTCTTGCTCCACCTCCTCCCCATACCCTTCCTTAGCCATCTCAGCTGAACCCTCTACTTCCAACAACAACAACCAACTCCTCCCCACACCCtCCTCCGAACCCTCCCCCAAAAAACCACCCCCTAAAAGAACCTCTACCAAAGACCGGCACACGAAGGTCGATGGCCGCGGCCGTCGAATTCGAATGCCGGCTCTCTGTGCCGCCAGGGTGTTCCAGCTCACGCGTGAGCTGGGACACAAGTCTGACGGCGAGACGATCGAGTGGCTTCTCCAGCAGGCGGAGCCATCCGTCATCGCCGCCACCGGAACCGGCACTATCCCGGCCAACTTCACCTCCCTCAACATCTCCCTCCGCAGCTCCGGCTCCTCCATGTCTGTCCCTTCCCAGCTTCGATCCAGCTACTTCCACAACTCAAGCTTCTCCCTCCAACCTAGAAGAAGCTTATTCCTAGAAAACACCAACACCAACACTCCCAACACAACAACAACAACACTCCTCAATTTCCAATCCAACAACAACAACAACCCCATCTTCCAAATCCAACCCAAGCACGAATTGCGCGAATCTTCATCACTAGACCTGTCCTCAGAGAACAACAACAACAACGAAGAGGGTAATTTGGGAAGAAAAAGAAGACCCTTGGAGCAAGACCTTTCCTCAACTATGCAACACCAAGTTGGAATTGGAAACTATTTGATGCAATCAAGCACTACTTCGGGGACAATTCCGGCGAGCCACCACGCTCAAATTCCGGCGAATATATGGATGCTAGCGAATTCAAATAGCCACCACAACCAAGGTGGTGGTGTGAGTGTGAGTGGTGGTGAAGCTCCTCCTTTGTGGACATTCCCTGGTGGTGTGAGTAACAGTGCTTTGTATAGAGGAACCATGTCAAGTGGGTTGCATTTCATGAACTTTCCAACCCCAATGGCACTTTTGCCAGGTCAACAATTAGGGTCTTCTGGGATTGGTGGTAACATGAACGAAGGGCATTTGAACATGCTTTCGGGGCTAAACCCTTATCGGACGACGGTGATCGGAGTTTCGGAGTCTCAGGCGAGTGAGTCACAACAGTCCCATCATGGTGGAAGCGAGGATCAACATGAATGA 1227 0.5134 MEGGSDDFHYHHHLHNHNHHRQNFPFQLLEKKEDPQDPSSCSTSSPYPSLAISAEPSTSNNNNQLLPTPSSEPSPKKPPPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAATGTGTIPANFTSLNISLRSSGSSMSVPSQLRSSYFHNSSFSLQPRRSLFLENTNTNTPNTTTTTLLNFQSNNNNNPIFQIQPKHELRESSSLDLSSENNNNNEEGNLGRKRRPLEQDLSSTMQHQVGIGNYLMQSSTTSGTIPASHHAQIPANIWMLANSNSHHNQGGGVSVSGGEAPPLWTFPGGVSNSALYRGTMSSGLHFMNFPTPMALLPGQQLGSSGIGGNMNEGHLNMLSGLNPYRTTVIGVSESQASESQQSHHGGSEDQHE 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01731 408 MobiDBLite consensus disorder prediction 38 70 - -
Gma06g01731 408 MobiDBLite consensus disorder prediction 389 408 - -
Gma06g01731 408 MobiDBLite consensus disorder prediction 224 259 - -
Gma06g01731 408 MobiDBLite consensus disorder prediction 79 98 - -
Gma06g01731 408 PANTHER TRANSCRIPTION FACTOR TCP14-LIKE 15 407 - -
Gma06g01731 408 Pfam TCP family transcription factor 83 251 IPR017887 -
Gma06g01731 408 ProSiteProfiles TCP domain profile. 85 139 IPR017887 -
Gma06g01731 408 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 15 407 IPR005333 GO:0003700
Gma06g01731 408 MobiDBLite consensus disorder prediction 30 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01731 Gma-Chr6 17540020 17541682 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01731 70 408 TCP Transcription Factor Family AT3G47620 41.966 1.88e-64 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gma06g01731 TCP 1.9e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01731 - - gmx:100792383 676.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01731 06 17540020 17541682 Gma04g01655 04 44983765 44985519 ECH
Gma06g01731 06 17540020 17541682 Gma06g01731 06 17540020 17541682 ECH