Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01720 ATGGATTCTCTGAAGATGTTGAAAGGTTATGGTAAAGTAGAACACCACCTCGAAGATCATCGTAACCCCAAACCCAAACCTAAATTCTCAAAACCCTTCATCGCCGCAATTTCCGTCTTCGCAATCCTCTTCCTTACTCTCACCTTCGCATTCGCCCTAGCATCCATGCTCCACCACAGTCACCACACCGAGTCACAACAACAACTTCTCAACTCGGCCGAGTCGATCCGAGTCGTCTGCAACGTCACTCGCTTCCCTGGCGCGTGCCTCGCCGCCATCCCGCCCTCCGCCAACGCCACAAACCCCCAAGCGATCCTCTCCCTCTCCCTCCGCGCGTCGCTCCACGCGCTCCAGAGCCTCAATTCCTCGCTAGGAACGAAGAATTCACGCGCGCTCGCCGACTGCAGGGACCAGCTGGACGACGCGCTGGGTCGACTCAACGACGCGCTGTCGGCCGCGGCGGCGCTGACGGAGGCGAAGATCTCCGACGTTCAGACGTGGGTGAGCGCGGCGATCACCGACCAACAAACGTGCCTCGACGGATTGGAAGAGGTCGGTGACGTGGCAGCGATGGAAGAGATGAAGAAAATGATGAAGAGGTCGAACGAGTACACCAGTAACAGTTTGGCTATTGTCGCTAATATTCGCAACTTGTTACAACGGTTCCACATGGCGCTACATTGA 684 0.5658 MDSLKMLKGYGKVEHHLEDHRNPKPKPKFSKPFIAAISVFAILFLTLTFAFALASMLHHSHHTESQQQLLNSAESIRVVCNVTRFPGACLAAIPPSANATNPQAILSLSLRASLHALQSLNSSLGTKNSRALADCRDQLDDALGRLNDALSAAAALTEAKISDVQTWVSAAITDQQTCLDGLEEVGDVAAMEEMKKMMKRSNEYTSNSLAIVANIRNLLQRFHMALH 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01720 227 TIGRFAM PME_inhib: pectinesterase inhibitor domain 48 214 IPR006501 GO:0004857
Gma06g01720 227 Gene3D Invertase/pectin methylesterase inhibitor family protein 70 217 IPR035513 -
Gma06g01720 227 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 75 215 IPR035513 -
Gma06g01720 227 CDD PMEI-like_3 79 215 - -
Gma06g01720 227 PANTHER PECTINESTERASE 3 222 - -
Gma06g01720 227 Pfam Plant invertase/pectin methylesterase inhibitor 75 211 IPR006501 GO:0004857
Gma06g01720 227 PANTHER PECTINESTERASE 1-LIKE 3 222 - -
Gma06g01720 227 SMART PMEI_2 71 211 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01720 Gma-Chr6 17397705 17398388 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01720 1 227 Carbohydrate Esterase AT1G53840 33.200 2.86e-32 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01720 - - gmx:100789567 401.749