Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01719 ATGTCTGGCCAGAGAAACTTCAGAACTTCAAAATTCACGGAAAGTGAGATTAATGATCTGATGTTGAGGCTACAAGCACTGCTACCACAACTAAACCAAACAAGAAACTCAAGGGCATCAGAAAGCTTGATGAAGATCATGAAGGAAACTTGCTCTCACATCAATAGGCTACAGAATGAGGTGAAAGACCTTGGTGAAAGGCTAGCAGAGCTGATTGATTCTGTAGACCTTAGTGACATTGACGAGGAGTGTCTTACAAGACTTTTACAACAATAA 276 0.4058 MSGQRNFRTSKFTESEINDLMLRLQALLPQLNQTRNSRASESLMKIMKETCSHINRLQNEVKDLGERLAELIDSVDLSDIDEECLTRLLQQ 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01719 91 Gene3D - 13 83 IPR036638 GO:0046983
Gma06g01719 91 PANTHER DNA BINDING PROTEIN 1 91 - -
Gma06g01719 91 PANTHER DNA BINDING PROTEIN 1 91 IPR044172 -
Gma06g01719 91 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 16 72 IPR036638 GO:0046983
Gma06g01719 91 Coils Coil 47 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01719 Gma-Chr6 17394720 17395489 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01719 2 76 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47710 44.737 7.19e-14 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01719 - - gmx:100810266 171.785