Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01711 ATGTTCCATGCATTCGTGAGCCTTATCGCACGCGGTTGGAAGCTGTTTGGGCACGGTGATGACGTCGGTAATGTCGCCGCCGCCACCGGAAGAGAATGCAAGGAGGACCTCCTCTGGTTTCGCGACATCGGAAACACCTTCATCGGCGTCTACGACGGCCACGGCGGCCCCGATTGCTCCCGCTATGTCTGTGATAACTTGTTCCACAATCTCCAAGAACTGCTGTACAAGATGGTTTGTGAACCTGATGAAACTGATTTGAACATGCACATACCTGCTGTCATGCTTCCACTAGATGCAGGTACAAGGCTGGAAAAAATGCTGACAACTACTTCATCTGTGTCTGTGCAACTACACTCGCCACTTCGACCAGCTGTTGACGTAGCAGAAGTATTTCTTTGGATGATGGCAGTTCTTACCATATTGTGTGCATCATATTGGTCAGCTTGGACGACCCGAGAAGCAGCTATTGAACAGGATAAGTTGCTAAAGGATGCTTCAGATGAACTCCCAAACACTAAATATGCTAGTGTTAGTGGAGTTGTAAATATGAATGTGAAAGCTGCAGTCCTTTTTGTTGTATTTGCTTCGTGTTTCCTGTTTATGCTTTACAAACTGATGTCGTCGTGGTTCATTGATGTTTTGGTTGTTCTCTTCTGTATTGGTGGTATTGAGGGCTTGCAAACATGCTTGGTTGCTCTTTTGTCCAGGTGGTTCAAGCATGCTGGAGAGTCATACATCAAAGTACCTTTCTTAGGAGCTATCTCATTGGAGTATATGCCATTCTTGCTTTCTTTTTTCTTCTTTTTAAACGGTGGCGTTTGGTTGTTGTATGTTGTTCTTGTTCGTGATGTTATCCTCGGGGGAATAGCACTGATAATCACAGTTCTACAGATTGTACATGTACCAAATCTCAAGttgtttcagcttcttctaaaAACAATATATAGTTCCATCATTAAGAACGATCTCGATTTGCACTCTTTAGAAGGAAAGTCTTTGACTTTGAGCATAATTACATTGAAGGTCCAACTTTCTGACACCACCCTGGGAACTAGAAGTCCCATCAGGTACCATAAGCGAAATGTAAACTCCAATCTTTATCACCCTTCAGCTCTGAACACCTTTGAACAGATAGTATATAGTGCCAAAGGAAAGCAAATTGTAGTTTTTCTTGACTACGATGGAACTCTCTCTCTAATTGTTACAGATCCAGATAAGGCTTTCATGACTAGAAAGATGAAAGCCACACTAAAGGGTATATCAAGACATTTTCCCACAACAATCGTGACCGGAAGGGAGCATAGTTAG 1311 0.4256 MFHAFVSLIARGWKLFGHGDDVGNVAAATGRECKEDLLWFRDIGNTFIGVYDGHGGPDCSRYVCDNLFHNLQELLYKMVCEPDETDLNMHIPAVMLPLDAGTRLEKMLTTTSSVSVQLHSPLRPAVDVAEVFLWMMAVLTILCASYWSAWTTREAAIEQDKLLKDASDELPNTKYASVSGVVNMNVKAAVLFVVFASCFLFMLYKLMSSWFIDVLVVLFCIGGIEGLQTCLVALLSRWFKHAGESYIKVPFLGAISLEYMPFLLSFFFFLNGGVWLLYVVLVRDVILGGIALIITVLQIVHVPNLKLFQLLLKTIYSSIIKNDLDLHSLEGKSLTLSIITLKVQLSDTTLGTRSPIRYHKRNVNSNLYHPSALNTFEQIVYSAKGKQIVVFLDYDGTLSLIVTDPDKAFMTRKMKATLKGISRHFPTTIVTGREHS 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01711 436 PANTHER SIGNAL PEPTIDE PEPTIDASE 68 314 IPR007369 GO:0004190|GO:0016021
Gma06g01711 436 Pfam Trehalose-phosphatase 391 434 IPR003337 GO:0003824|GO:0005992
Gma06g01711 436 Gene3D - 28 114 IPR036457 -
Gma06g01711 436 Pfam Signal peptide peptidase 181 315 IPR007369 GO:0004190|GO:0016021
Gma06g01711 436 ProSitePatterns PPM-type phosphatase domain signature. 47 55 IPR000222 GO:0043169
Gma06g01711 436 PANTHER SIGNAL PEPTIDE PEPTIDASE-LIKE 2 68 314 - -
Gma06g01711 436 SUPERFAMILY HAD-like 389 435 IPR036412 -
Gma06g01711 436 Gene3D - 388 436 IPR023214 -
Gma06g01711 436 SUPERFAMILY PP2C-like 42 87 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01711 Gma-Chr6 17266991 17273683 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01711 37 74 PP2C-type Phosphatase Gene Family AT3G17090 38.806 1.02e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01711 K09597 - gmx:100776907 452.981