Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01709 ATGGAAAATGGAAACACAGCCAACGAACCCGCCAGCTTCTGGACTCAAGCAAACGCTCTTCTTAGGAAGAATTTAACCTTTCAGAAACGAAATGTTAAAACAAACGTTCGACTCATCATGTCCCCGTTCATTTTGTGTCTGTTGCTGGTTCTGCTCCAAAGCCTAGTGGAGAACCAACTGGACAAGGCTGAGAACAAGTGTGGCTGCGTTTGTGTTAGGAGACAAGGGGACACGTGTCTCGAGGAGGAGTGCGGGGTTGAGCATTCGGATTTGGACCAGGTTGCCACGTGTCCCATTCCCAGCCCTCCAGAATGGTCTCCTCTGTTGCAAGTGCCGGCACCACAGTACCGTGCCGTGAGAACAGATTATTTCCCATTTTCTGATTTTCCAAACTCGTCCTGCCGGAGGAATGGCTCTTGCCCTGTCACTATGTTCTTCACTGGCACTAACCAATCTTTTGGAGAAATTATATCTAGGAATATGATCCCAAGTAACTTGAGTTCTATAAACAGTTCTGATATTACGGCTAGTTTGGCATCAAATGTAGTGGGATCAGATTCAGAGCCAGAGAACACCAATTTTCTGGAACCTGCTTTCTTTTCAGACCTTCCTATTTATTATCTACAGAATCAGTGCACACAGAACTCTACATTCTCCGTTTCTCTTCAGATAGCAGGCATTAGCAAGCAGCAAGAGGTAATATGTGCTCAGGGTTTACGTTTATGGCGTAATAGTTCTTCTGAGGTGAACAATGAGCTATATAAAGGTTATCGGAGAAGTAACACAGAGAGACAGATCAATGAGATAGCTGCAGGTTATGATTTTTTAAATTCAAATCGGAGTATATTTAATGTCAGCATATGGTACAACTCAACCTACAAAAATGACACTGGCTTTAATCAAATTGCATTGGCGCGTATTCCTCGTTCTGTAAATTTGGTATCAAATGCCTACCTTCAGTTTCTATTGGGACCTGGTACCAAAATGTTTTTTGAGTTTGTAAAGGAAATGCCAAAACCTGAGACCCCGATTAAATTTGATTTGGCTTCTCTTTTGGGTGGTCTCTTCTTTACATGGGTCATCCTACAACTTTTCCCTATTGCCTTGACATCGTTAGTATATGAGAAGCAACAAAACTTAAGAATCATGATGAAAATGCATGGCCTTGGAGACGGGCCATATTGGATGATTTCGTATGGTTATTTTCTTGCCATATCCATTGTCTACATGCTGTGTTTTGTGATTTTTGGCTCAGTCATAGGGTTGAATTTCTTCACAATGAATGACTACAGCATCCAATTTGTGTTTTATTTCATCTATATAAATTTACAAATTTCACTGGCTTTTTTATTGGCTTCCCTGTTTTCAAATGTTAAAACTGCTACAGTACTTGCATACATAGGTGTGTTTGGAACTGGGCTATTAGCTGGCTTTCTTTTCCAATTTTTTGTTCAAGACACGTCGTTTCCAAGAGGGTGGATCGTTGTTATGGAGTTGTATCCTGGTTTTGCTTTATATCGTGGGCTATATGAGTTTTCGCAATATGCCTTTAGTGGGGATGCTTTGGGGAGCGATGGTATGCGCTGGAGCGATCTGAGTGATAGCACAAATGGCATGAAGGAGGTCTTAATTATCATGTTCGTGGAGTGGCTATTGGTGCTTTTGTTTGCTTATTATATCGATCAAGTTTTGTCTTCAGGAAGCAGGAAAAGTCCTCTTTTTTTCTTGAAAAGATTTCAGAAAAAGCCTCATTCATCTTTTCGGACGCCTAGTATCCAAAGGCAAAAATCTAAGGTTTTTGTTCAGATAGAGAAACCTGATGTCACTCAAGAGAGGGAGAAGGTGGAGCAACTGCTACTTGAACCGACTATTAATCAAGCAATTGTATGCGACAACATGAGAAAAGTCTATCCGGGGAGGGATGGCAACCCGGAGAAACTTGCAGTGAGAGGGTTGTCCCTTGCTTTGCCTCAAGGGGAATGCTTTGGTATGCTTGGTCCCAATGGTGCTGGGAAGACTTCTTTTATCAATATGATGATTGGTCTCACCAAGCCAACCTCTGGTACCGCATTTGTTCAAGGTCTTGACATAAGAACTCATATGGATGGAATATATACTAGCATGGGTGTATGCCCACAGCATGACTTGCTGTGGGAATCCCTAACAGGAAGAGAGCACCTACTCTTTTACGGCAGACTTAAAAATCTTAAAGGTTCAGCCTTAACACAAGCAGTGGAAGAATCGTTGAAAAGTGTAAACCTTTTTAATGGAGGAGTTGCTGATAAACAAGCTGGAAAATACAGTGGAGGAATGAAGAGGAGGCTTAGTGTCGCAATTTCATTGATTGGAGATCCTAAAGTTGTTTATATGGATGAACCAAGTACTGGATTAGACCCTGCATCAAGAAACAACTTATGGAATGTTGTTAAGCGTGCAAAACAGGATCGTGCAATCATTCTTACCACACATTCCATGGAAGAAGCAGAAGTCCTATGTGATCGATTAGGAATATTTGTAGACGGGGGCTTGCAGTGCATAGGCAATCCAAAGGAGTTGAAAGCCAGGTATGGAGGAACATATGTCTTCACAATGACAACATCTATGGATCATGAAAAGGATGTAGAGAATTTGGTGAGGCAACTCTCACCAAATGCTAACAAGATCTACCATATCTCTGGCACCCAAAAGTTCGAGCTACCAAAGGATGAGGTTAAAATAGCAAATGTATTCCAAGCTGTTGAAACTGCAAAGAGAAGCTTCACCGTTTCAGCGTGGGGTTTAGCTGATACCACACTGGAAGATGTCTTCATTAAAGTTGCACGTGGGGCTCAGGCATTTGACACCTTGTCATAA 2853 0.4182 MENGNTANEPASFWTQANALLRKNLTFQKRNVKTNVRLIMSPFILCLLLVLLQSLVENQLDKAENKCGCVCVRRQGDTCLEEECGVEHSDLDQVATCPIPSPPEWSPLLQVPAPQYRAVRTDYFPFSDFPNSSCRRNGSCPVTMFFTGTNQSFGEIISRNMIPSNLSSINSSDITASLASNVVGSDSEPENTNFLEPAFFSDLPIYYLQNQCTQNSTFSVSLQIAGISKQQEVICAQGLRLWRNSSSEVNNELYKGYRRSNTERQINEIAAGYDFLNSNRSIFNVSIWYNSTYKNDTGFNQIALARIPRSVNLVSNAYLQFLLGPGTKMFFEFVKEMPKPETPIKFDLASLLGGLFFTWVILQLFPIALTSLVYEKQQNLRIMMKMHGLGDGPYWMISYGYFLAISIVYMLCFVIFGSVIGLNFFTMNDYSIQFVFYFIYINLQISLAFLLASLFSNVKTATVLAYIGVFGTGLLAGFLFQFFVQDTSFPRGWIVVMELYPGFALYRGLYEFSQYAFSGDALGSDGMRWSDLSDSTNGMKEVLIIMFVEWLLVLLFAYYIDQVLSSGSRKSPLFFLKRFQKKPHSSFRTPSIQRQKSKVFVQIEKPDVTQEREKVEQLLLEPTINQAIVCDNMRKVYPGRDGNPEKLAVRGLSLALPQGECFGMLGPNGAGKTSFINMMIGLTKPTSGTAFVQGLDIRTHMDGIYTSMGVCPQHDLLWESLTGREHLLFYGRLKNLKGSALTQAVEESLKSVNLFNGGVADKQAGKYSGGMKRRLSVAISLIGDPKVVYMDEPSTGLDPASRNNLWNVVKRAKQDRAIILTTHSMEEAEVLCDRLGIFVDGGLQCIGNPKELKARYGGTYVFTMTTSMDHEKDVENLVRQLSPNANKIYHISGTQKFELPKDEVKIANVFQAVETAKRSFTVSAWGLADTTLEDVFIKVARGAQAFDTLS 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01709 950 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 617 868 IPR027417 -
Gma06g01709 950 SMART AAA_5 658 842 IPR003593 -
Gma06g01709 950 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 628 865 IPR003439 GO:0005524
Gma06g01709 950 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 9 950 IPR026082 GO:0016021|GO:0055085|GO:0140359
Gma06g01709 950 PANTHER ABC TRANSPORTER A FAMILY PROTEIN 9 950 - -
Gma06g01709 950 Pfam ABC-2 family transporter protein 347 559 - -
Gma06g01709 950 ProSitePatterns ABC transporters family signature. 767 781 IPR017871 GO:0005524
Gma06g01709 950 Gene3D - 620 892 IPR027417 -
Gma06g01709 950 Pfam ABC transporter 650 794 IPR003439 GO:0005524
Gma06g01709 950 CDD ABC_subfamily_A 632 853 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01709 Gma-Chr6 17236371 17245992 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01709 604 876 Calmodulin-binding Proteins AT2G36910 22.028 5.10e-12 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01709 - - gmx:100805474 1882.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01709 06 17236371 17245992 Gma06g01709 06 17236371 17245992 ECH