Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01707 ATGATCTTGACCATCCACGAAACCAAACTACAAACAGTAATACGAGTGGGAGCTGGAACACTTGATTCCAAAGTAACTGCACCCGCACTCTCACCACAACCACTGCCACCTAAACGCACCGTTTCATCAGTTACACCCTCCACCGTACGATCAAGGCGAGTCATCGCATCAACGGTCACGACAAGATTTGCCGCCAAATATTCGGTCACATTTTCAGTTTCACTCTCTCTTCTTCCATGGAATTGTAAGATTTTAGGACAAGAGCTTCCACGTTTATCAGATTGTGATCTCAAAATGGGGAAATCACCAGGAAAATGGATCAAAACCGTACTATTTGGGAAAAAGTCATCCAAATCAAATATTTCAAAAGGAAGAGAGAAGATTGTCAATAAAAAAGCAGTTGTTGCTTCCAACGAGTTGGAAAATGGTTTGTCCTTAGATCCAACCCCCAATGAGATTGCTACAAAGGAGGAGGACCTTGAACTGGAGAATGAAGAATCAGAAAATATTTTACCTGAGAATCAAGAAAGAGACATTAATGGATCTGTTGATCCGGATGCACCACCTGATCCAGAGAAAATCAGGCAGGAGGAAGCAGCAACAAAGGCACAAGCTGCTTTCAGGGGTTACTTGGCACGCAGGGCATTTAGGGCCCTAAAAGGCATCATAAGGTTGCAAGCACTTATTCGTGGGCACTTGGTTAGGAGACAAGCTGTTGTTACATTATGCTGCATGTATGGAATTGTAAAGTTACAAGCACTTGTTCGTGGAGGAAGGATTAGACAGTCTAATGTTGGATTTGAAATCCATGAGAAGTGCAATCTATTTAAGCCTCTGGATGGAAAACTTGGTGAGCCAGTTGGTATCTCCACAAAAATTTCAAAGCTGTCTGCAAATACTTTCATCCGTAAGCTTGTTGCTTCATCAATTACAATAATGGCCCTGCGCCTGCAATATGTTAGTGGAGATCCAAATTCAGTCTTAAGCTGGTTGGAACGCTGGTCCGCATCTTACTTCTGGAAACCAGTTCCCCAACCCAAGAAAATTCGAGACTCTAAATCTCATAGAAAGCATGGTAATATTTCAAATGGAGAAGCTCAAATTACCAAGTCAAAACGCACTACCAGGAAGCTTCCTATTGCAAATTTTGAACCAGCCCTGGTGCAAACAAATCCTGAATTCGAGAAACCAAAACGTAATTTCAGAAAAATACCACACCAAGTGTTGGATCCAGAGCTAGAAAATCCTCAAAGTGAGCTTGAAAAGGTTAAACGTAGCTTGAGAAAGATTCATAACCCTGTTGTTGAGAATGCTGTTCAGCCAGAAGTTGAAATTGAGACCCCAAAGGAGCATTTGGAAATAGCAACAGTTATTCCAAGTCACGCTGTTTCAGAACAAGCAATCATTACTCCCGATGACAAGATCGAGCAAGAAGAAACTTTAACCATCTTCAATGTGCCAGATGTCGAAATTTCTCCAAGACCATCAGTTAACATGGAAGTGTATGACATTCCTAGCAATTATCAAGTGTCTGTAGAATCAAAGCCCTTGTCAGAGACTCCAATTAAAGATAGAAACACATCTCACGGAAAAGTTAAAAATGAGCTAGGCAATCTACCAGAGACTATTTTCAAAGATGAAAACTCCCTATTAACAAATGGAGATTTGAGCTATAATGATCTGACAGGTAATGAAAACCAGAAACCTACACGTAAAGCCTCAAATTTGACGAAGCAGGAGAATGGAGATGATGGCTTAAAGAATAGTCCAAAATTACCAAGTTATATGGCAGCAACTGAATCTGCCAAGGCAAAGTTGAGGGCACAAGGGTCCCCAAGGTTTGGACAAGATGAAACTGAGAAAAACAACACTGCTGGTTCTGGGAGACATTCTCTGCCCTCTTCAACTAACAAGAAGATTAGTTCATATTCACCTAAGACACAGAGATCAGTTCCAGCAGGTGGCAAGGGGGGAAACAAAAGTGACAGAACAGTACCATCTTCTAAGGCAGGGAATGGGAAGGTAATTCAAGCAGAGTGGAGGAGGTGA 2049 0.4168 MILTIHETKLQTVIRVGAGTLDSKVTAPALSPQPLPPKRTVSSVTPSTVRSRRVIASTVTTRFAAKYSVTFSVSLSLLPWNCKILGQELPRLSDCDLKMGKSPGKWIKTVLFGKKSSKSNISKGREKIVNKKAVVASNELENGLSLDPTPNEIATKEEDLELENEESENILPENQERDINGSVDPDAPPDPEKIRQEEAATKAQAAFRGYLARRAFRALKGIIRLQALIRGHLVRRQAVVTLCCMYGIVKLQALVRGGRIRQSNVGFEIHEKCNLFKPLDGKLGEPVGISTKISKLSANTFIRKLVASSITIMALRLQYVSGDPNSVLSWLERWSASYFWKPVPQPKKIRDSKSHRKHGNISNGEAQITKSKRTTRKLPIANFEPALVQTNPEFEKPKRNFRKIPHQVLDPELENPQSELEKVKRSLRKIHNPVVENAVQPEVEIETPKEHLEIATVIPSHAVSEQAIITPDDKIEQEETLTIFNVPDVEISPRPSVNMEVYDIPSNYQVSVESKPLSETPIKDRNTSHGKVKNELGNLPETIFKDENSLLTNGDLSYNDLTGNENQKPTRKASNLTKQENGDDGLKNSPKLPSYMAATESAKAKLRAQGSPRFGQDETEKNNTAGSGRHSLPSSTNKKISSYSPKTQRSVPAGGKGGNKSDRTVPSSKAGNGKVIQAEWRR 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01707 682 MobiDBLite consensus disorder prediction 555 682 - -
Gma06g01707 682 Pfam IQ calmodulin-binding motif 198 217 IPR000048 GO:0005515
Gma06g01707 682 Pfam IQ calmodulin-binding motif 220 237 IPR000048 GO:0005515
Gma06g01707 682 MobiDBLite consensus disorder prediction 512 534 - -
Gma06g01707 682 Gene3D - 194 242 - -
Gma06g01707 682 ProSiteProfiles IQ motif profile. 220 242 IPR000048 GO:0005515
Gma06g01707 682 SMART iq_5 195 217 IPR000048 GO:0005515
Gma06g01707 682 SMART iq_5 218 239 IPR000048 GO:0005515
Gma06g01707 682 MobiDBLite consensus disorder prediction 555 583 - -
Gma06g01707 682 PANTHER IQ-DOMAIN 5-RELATED 99 670 - -
Gma06g01707 682 MobiDBLite consensus disorder prediction 159 192 - -
Gma06g01707 682 ProSiteProfiles IQ motif profile. 196 224 IPR000048 GO:0005515
Gma06g01707 682 PANTHER PROTEIN IQ-DOMAIN 31 99 670 - -
Gma06g01707 682 Pfam Protein of unknown function (DUF4005) 579 661 IPR025064 -
Gma06g01707 682 MobiDBLite consensus disorder prediction 615 649 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01707 Gma-Chr6 17208312 17218562 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01707 99 682 IQD Protein Family AT1G74690 43.750 2.16e-122 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01707 - - gmx:100786022 1135.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01707 06 17208312 17218562 Gma04g01676 04 45580518 45587717 ECH
Gma02g00190 02 1835633 1840918 Gma06g01707 06 17208312 17218562 ECH
Gma01g00396 01 4848928 4853865 Gma06g01707 06 17208312 17218562 ECH
Gma08g02796 08 43947319 43952431 Gma06g01707 06 17208312 17218562 ECH
Gma18g01115 18 16136569 16141916 Gma06g01707 06 17208312 17218562 ECH
Gma06g01707 06 17208312 17218562 Gma06g01707 06 17208312 17218562 ECH