Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01704 ATGGAGTTTGGTTCAGAAAGATCTGGTCATGAAGTCAAGGATGAGAAGAGAAGTGAATCTAGTGTTGGAGATGAAGAAGATCGTCGTGAACAAGAGATTGTTACGCAGGAGCCACCCCTGTCTACTACCGAAAGATCCACAGTGGAGGCTGGGCCAAATGCTTCTTCCCTAACCAAAAAGGAAGAGGCTGTTGATGAACTTGAAGTTGCCAAAGCCGAAATGGGTGAAGTGATGGAAGAAAACCAACGACTAAAGACGTGTTTGAACCGAATACTGAACGATTACCGCGCACTCCAAATGCAATTCCACAACATAGTTGAACAAGAGACAAAAGATTCTTCTGATCAGAAAGTGAACAACAACAATGACCAATATCAAATAGATGAATCAAACCTAGTTTCCCTCAGTCTTGGAAGACTTCCAACAAGAAACAATAATAAAGTCCCTAATAATAAACCATTGAAAGAGGAAGCAGAAAAAGAAGATAAAGAAGGCTTGTCCCTTGGATTAGACTGCAAATTTGAAACATCAAAATCTGGAATAAGCACAACTGAATATTTGCCAATTCATCAAAGCCCTAATAATAGTGTTGAAGAAGTGCCAAAGGAAGAAGCAGCTGGTGAGAGTTGGCAACCTGGCAAGGGAATAAAGACAGCTAGAGATGCTACAGGAGAGGATGAAGTTTCTCAACAAAATCCAGCAAAGAAAGCAAGGGTTTGTGTGAGGGCAAGATGTGACACTCCAACTATGAACGATGGATGTCAATGGAGGAAATATGGACAGAAGATTTCAAAGGGAAATCCTTGCCCTCGAGCTTACTATCGTTGCACGGTTGCACCATCATGCCCAGTAAGAAAGCAGGTGCAAAGATGTGCACAAGACATGTCCATATTATTCACCACCTACGAAGGCAACCACAACCACCCTCTTCCACTCTCAGCCACAGCCATGGCCTCCACCACTTCAGCAGCTGCATCCATGCTATTATCCGGCTCATCAACCTCACACTCCGGAACAAGGCCTTCCACAGCCATGACCACCGCAGATCTTCATGGAATGAACTTCTTCCTATCAGACGGTTCCAAATTATCAAAGCAATACTACCTGTCCCATCCTGCAGCACTCTCATCTTCACCTTCACACCCCACCATCACTCTTGACCTAACTTCCAATAATAATCCATCCTCATCATCTTCTGCTGCTCTTGTTAAATTCACTTCAAACTCAAACTACAATAACACACAAAGGTACCCTCTTTCCACAAGCTTAAACTTCAGTTCCTCAGAATCCAACAATGCAACAACTTCTTGGAGCAATAATGGGTTCCTCAGCTACAACAACACTCTACCATATAATAGCAATAGGAATGTGACAAATGTCCTTAGCAACATAAACCTTGGAAGACAACAACAACAACCAATGGAAAACATCTACAACTCCTACATGCAAAGGAACAACAATGTTCCAATCTCTCCACCACAACATTCTCTGCCAGATACCATAGCTGCAGCGACAAAAGTAATCACTGCAGACCCCAATTTTCAATCAGCTTTGGCAGCAGCACTTACAACAATTATTGGTTCTGGAAGCACTACTCAAGGAAACCATGGTGGTGCAGGGGAAAATCTGAGTCAGAAAATGAAATGGGGTGAACTGTTTCCTTCATCTTCTTCTGCATTACCTTCATCTTCAACAAAAGTCAATGGTTGTGCATCAAGCTTCTTGAACAAATCAGCCGCTAATACACAACCAGGAACAGCTTTGATGTTTCTTCAGCCACCTTTGCCTCTTTCTAGCCCCAAAAGCGCTTCTGGGTCTCCAGGAGATCATATAGACAAGAGAAATTGA 1848 0.4286 MEFGSERSGHEVKDEKRSESSVGDEEDRREQEIVTQEPPLSTTERSTVEAGPNASSLTKKEEAVDELEVAKAEMGEVMEENQRLKTCLNRILNDYRALQMQFHNIVEQETKDSSDQKVNNNNDQYQIDESNLVSLSLGRLPTRNNNKVPNNKPLKEEAEKEDKEGLSLGLDCKFETSKSGISTTEYLPIHQSPNNSVEEVPKEEAAGESWQPGKGIKTARDATGEDEVSQQNPAKKARVCVRARCDTPTMNDGCQWRKYGQKISKGNPCPRAYYRCTVAPSCPVRKQVQRCAQDMSILFTTYEGNHNHPLPLSATAMASTTSAAASMLLSGSSTSHSGTRPSTAMTTADLHGMNFFLSDGSKLSKQYYLSHPAALSSSPSHPTITLDLTSNNNPSSSSSAALVKFTSNSNYNNTQRYPLSTSLNFSSSESNNATTSWSNNGFLSYNNTLPYNSNRNVTNVLSNINLGRQQQQPMENIYNSYMQRNNNVPISPPQHSLPDTIAAATKVITADPNFQSALAAALTTIIGSGSTTQGNHGGAGENLSQKMKWGELFPSSSSALPSSSTKVNGCASSFLNKSAANTQPGTALMFLQPPLPLSSPKSASGSPGDHIDKRN 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01704 615 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 21 610 IPR044810 GO:0003700
Gma06g01704 615 SUPERFAMILY WRKY DNA-binding domain 243 311 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma06g01704 615 PANTHER WRKY TRANSCRIPTION FACTOR 61-RELATED 21 610 - -
Gma06g01704 615 Coils Coil 60 80 - -
Gma06g01704 615 MobiDBLite consensus disorder prediction 204 233 - -
Gma06g01704 615 MobiDBLite consensus disorder prediction 1 63 - -
Gma06g01704 615 MobiDBLite consensus disorder prediction 139 163 - -
Gma06g01704 615 MobiDBLite consensus disorder prediction 35 54 - -
Gma06g01704 615 Gene3D WRKY domain 234 312 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma06g01704 615 SMART WRKY_cls 250 310 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma06g01704 615 MobiDBLite consensus disorder prediction 585 615 - -
Gma06g01704 615 MobiDBLite consensus disorder prediction 1 34 - -
Gma06g01704 615 ProSiteProfiles WRKY domain profile. 245 311 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma06g01704 615 Pfam WRKY DNA -binding domain 251 309 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01704 Gma-Chr6 17151477 17156609 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01704 74 533 WRKY Transcription Factor Family AT5G15130 41.116 9.96e-82 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma06g01704 WRKY 3.2e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01704 - - gmx:100804403 1129.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01704 06 17151477 17156609 Gma04g01680 04 45770569 45776711 ECH
Gma19g00181 19 2218178 2221556 Gma06g01704 06 17151477 17156609 ECH
Gma02g00196 02 1870808 1877287 Gma06g01704 06 17151477 17156609 ECH
Gma01g00390 01 4785070 4790972 Gma06g01704 06 17151477 17156609 ECH
Gma18g01118 18 16214826 16219400 Gma06g01704 06 17151477 17156609 ECH
Gma06g01704 06 17151477 17156609 Gma06g01704 06 17151477 17156609 ECH