Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01697 ATGGCGGGTGGAACTGTCTTCTGCGCTGCTGCTACTGCTGCTTCTAATTTGACAACAACCACTTTTCTTCACAACCAAACACCTCCTTCCACCTCCTCTCAGCCTCCTCTCGATTCTCTTTTCCTCTCTGCCTCTTCCCCTTTCCTCGGTTCAAGATCTATAGTGAGTTTTGGAGATGTTCAAGGAGGGAAGGGGTGCAATGATTCATTCTTCCGCCCCTATGATGAGAATGGGGATGAGGACATGGACGAGTACTTCCACCAGCCTGAGAAGAAGCGCAGGCTCTCCGTGGAGCAAGTGAAGTTTCTTGAGAAGAGCTTTGATGAGGAGAACAAGCTCGAGCCCGAGAGGAAGATTTGGCTAGCCAAGGAACTCGGCTTGCAGCCTAGGCAGGTGGCGATTTGGTTTCAGAACCGCCGCGCGCGCTGGAAGACCAAGCAGATGGAAAAGGACTATGATTCCCTGCAGACTAGTTACAATGATCTCAAGGCTAACTATGACAACCTTCTCAGGGAAAAGGATAAACTCAAAGCTGAGGTGGCAAGGCTCACTGAGAAGGTGCTTGGAAGAGAGAAAAATGAGAGTCACTTGGAACAGGCTGAAACCAACGGATTGCAGGAGCCGCTGCACAAGTCTTTGGTTGATTCAGCTTCTGAGGGTGAAGGGTCCAAAGTGACCTTTGAGGCTTGTAAACAGGAGGACATTAGTTCAGCCAAGAGTGACATATTTGATTCATCAGAAAGCCCACAATACACTGATGGAGTTCACTCTGCACTTCTAGAGACTGGTGATTCTTCTTATGTGTTCGAACCTGATCGATCTGATGTGTCTCAGGATGAAGAAGATAACTTGAGCAAGACCCTTCTGCCTCATTACATTTTTCCCAAGCTTGAAGATGTTGATTACTCCGACCCACCTCATGGTTCATGTAATTTTGGAATTCCGGAGGAAGATCAAGCCATTTGGTCTTGGCCTTACTGA 981 0.4801 MAGGTVFCAAATAASNLTTTTFLHNQTPPSTSSQPPLDSLFLSASSPFLGSRSIVSFGDVQGGKGCNDSFFRPYDENGDEDMDEYFHQPEKKRRLSVEQVKFLEKSFDEENKLEPERKIWLAKELGLQPRQVAIWFQNRRARWKTKQMEKDYDSLQTSYNDLKANYDNLLREKDKLKAEVARLTEKVLGREKNESHLEQAETNGLQEPLHKSLVDSASEGEGSKVTFEACKQEDISSAKSDIFDSSESPQYTDGVHSALLETGDSSYVFEPDRSDVSQDEEDNLSKTLLPHYIFPKLEDVDYSDPPHGSCNFGIPEEDQAIWSWPY 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01697 326 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-54 26 323 - -
Gma06g01697 326 ProSitePatterns 'Homeobox' domain signature. 121 144 IPR017970 GO:0000981|GO:0006355
Gma06g01697 326 SUPERFAMILY Homeodomain-like 78 148 IPR009057 -
Gma06g01697 326 CDD homeodomain 91 147 IPR001356 GO:0003677
Gma06g01697 326 Coils Coil 145 193 - -
Gma06g01697 326 Gene3D - 141 189 - -
Gma06g01697 326 ProSiteProfiles 'Homeobox' domain profile. 86 146 IPR001356 GO:0003677
Gma06g01697 326 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 26 323 IPR045224 GO:0003700
Gma06g01697 326 Pfam Homeobox associated leucine zipper 146 187 IPR003106 GO:0006355|GO:0043565
Gma06g01697 326 PRINTS Lambda-repressor HTH signature 117 126 IPR000047 GO:0003677
Gma06g01697 326 PRINTS Lambda-repressor HTH signature 126 142 IPR000047 GO:0003677
Gma06g01697 326 Pfam Homeodomain 91 144 IPR001356 GO:0003677
Gma06g01697 326 SMART HOX_1 89 150 IPR001356 GO:0003677
Gma06g01697 326 Gene3D - 94 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01697 Gma-Chr6 17092308 17094654 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01697 89 205 Homeobox Transcription Factor Family AT3G01470 62.185 8.17e-45 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Gma06g01697 Homeodomain 1.4e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01697 - - gmx:732618 651.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01697 06 17092308 17094654 Gma04g01689 04 45901385 45903324 ECH
Gma06g01697 06 17092308 17094654 Gma06g01697 06 17092308 17094654 ECH