Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01684 ATGGCGAGGTCTCCTTCTTGTGAAAAAATCAATGTCAAAAGGGGTTTGTGGACTACAGAAGAAGATACAAAGAAGCTTGCATTTGGCTCCAAGCATGGATCTGGGCTCAAGAGGTGTGGAAGGAGTTGTAGGATTAGGTGGACTAACTATCCCAGGCCTGATCTTAAAGACGACAACTTCACAACCCAAGAAGAAGATCTAATCATTAAGCTTCATGCAGCCATAGGTAGCAGGTGGTCTATAATAGCCCAACAACTTCCTGGGAGAACAGACACTGATGTAAAGAACTATTGGAACTCAAAGCTGAAAAAGAAGCTCTCTCAATTGGGGATTGACCCTGTCACCCACAAGCCCTTCTCTAAACTCATTGCTGACTATGGAAACATTGGGGGTTGCCAGAAACCAAGTACTCGAATTGCTTCAATCAATAAGGACTTCAAGAATGCAATGATGCTAAAATCAGAATCCCATCAAACCCTGCCAGAGGGATTTATTACAAACATCAATGACCAACCAAAGCCACCACCCAAAATGGAAACCACTGGAAACAACTTTTTGTTCAATAGAACTCATGGTGATGACCTCTCAATGAATCTTGACCAGTTCCAAGCCATATCAATGAAATCGGGTGCCTCGAATTGCATAGACTTCGAGAATGAGATCATGCCAGTGTCTATGTTCGGGGAAGATTGCTTTTCAAAAACTTCATCACCATCTACTCCTTCTACTTGTTCCACTACAGCTTTTAGTTGGAACGACTTCCTTTTGGAAGATGCTTTTACACCACTTGCTAACCAAGAACAAGACTTGGTGAGTCAAATAGAGGATCTGACTTGGAATAAGATAGAGGTCAAGTCACTGCAAGCCTCAGGTAGTGACTTACAATTTTCCTCAGCATCTGACATTTCATTCATGGAAGCCATGCTTGATCAAGAAAATGAGATGTTCCTAAGTTTTCCTCACCTTATGGAGGAACCATCCAAGTTGAATTAA 993 0.4199 MARSPSCEKINVKRGLWTTEEDTKKLAFGSKHGSGLKRCGRSCRIRWTNYPRPDLKDDNFTTQEEDLIIKLHAAIGSRWSIIAQQLPGRTDTDVKNYWNSKLKKKLSQLGIDPVTHKPFSKLIADYGNIGGCQKPSTRIASINKDFKNAMMLKSESHQTLPEGFITNINDQPKPPPKMETTGNNFLFNRTHGDDLSMNLDQFQAISMKSGASNCIDFENEIMPVSMFGEDCFSKTSSPSTPSTCSTTAFSWNDFLLEDAFTPLANQEQDLVSQIEDLTWNKIEVKSLQASGSDLQFSSASDISFMEAMLDQENEMFLSFPHLMEEPSKLN 330
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01684 330 ProSiteProfiles Myb-like domain profile. 52 102 IPR001005 -
Gma06g01684 330 CDD SANT 59 102 IPR001005 -
Gma06g01684 330 SUPERFAMILY Homeodomain-like 11 98 IPR009057 -
Gma06g01684 330 SMART sant 56 104 IPR001005 -
Gma06g01684 330 SMART sant 13 53 IPR001005 -
Gma06g01684 330 Pfam Myb-like DNA-binding domain 59 100 IPR001005 -
Gma06g01684 330 Gene3D - 58 118 - -
Gma06g01684 330 PANTHER F14D16.11-RELATED 1 327 - -
Gma06g01684 330 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 52 106 IPR017930 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gma06g01684 Gma-Chr6 16830747 16832510 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01684 1 325 MYB Transcription Factor Family AT3G28470 38.596 5.55e-61 196
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gma06g01684 Myb_DNA-binding 2.1e-11 CL0123
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01684 K09422 - gmx:100795381 655.981
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01684 06 16830747 16832510 Gma06g01684 06 16830747 16832510 ECH
Gma04g01709 04 46299652 46301025 Gma06g01684 06 16830747 16832510 GST