Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01671 ATGGCTTCCGCCGGCGATCTTTTCACGCATGGTTTGCCGGAAGTTGGTGGTGCCGGGAAGTTACACGTGCTTGCTGTTGATGACAGCCACGTGGACCGCAAGGTGATCGAGCGGTTGCTCAAAATCTCGTCTTGCAAAGTGACGGTGGTGGAAAGTGGTAGCAGGGCTCTACAGTATCTGGGGTTGGATGGAGAAAAAAGTTCCATTGGTTTTGATAGTGTGGATGTTAATTTGATAATGACGGATTATTCCATGCCGGGGATGACAGGATACGAATTGCTCAAAAAGATTAAGGAGTCATCTGTTTTTAGAGAGGTTCCAGTGGTGGTTATGTCGTCTGAGAATATCTTGACCAGAATTGATAGTTGCTTGGAGGAAGGAGCAGAGGAGTTTCTGTTGAAACCTGTCAAGTTGTCAGATGTAAAACGCGTAACAGATTTCATCATGCGAGGCGAAGGGATGAAAGGAGTAAAAAGATCTAAAAAAAGAAGCCGATCAGATGATTGCATTCCATCTCTATCAACTGCATTTGCATCAGTTTCTCATCCATGTGATCTATCATCACCTCCATCACCATGTGTATCGCAATCGAAGAAATCTAGATTGAGCATATAG 615 0.4455 MASAGDLFTHGLPEVGGAGKLHVLAVDDSHVDRKVIERLLKISSCKVTVVESGSRALQYLGLDGEKSSIGFDSVDVNLIMTDYSMPGMTGYELLKKIKESSVFREVPVVVMSSENILTRIDSCLEEGAEEFLLKPVKLSDVKRVTDFIMRGEGMKGVKRSKKRSRSDDCIPSLSTAFASVSHPCDLSSPPSPCVSQSKKSRLSI 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01671 204 PANTHER TWO-COMPONENT RESPONSE REGULATOR 16 202 IPR045279 GO:0009736
Gma06g01671 204 Pfam Response regulator receiver domain 23 142 IPR001789 GO:0000160
Gma06g01671 204 Gene3D - 20 181 - -
Gma06g01671 204 SMART REC_2 21 145 IPR001789 GO:0000160
Gma06g01671 204 MobiDBLite consensus disorder prediction 181 204 - -
Gma06g01671 204 ProSiteProfiles Response regulatory domain profile. 22 149 IPR001789 GO:0000160
Gma06g01671 204 SUPERFAMILY CheY-like 20 150 IPR011006 -
Gma06g01671 204 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR3-LIKE PROTEIN 16 202 - -
Gma06g01671 204 CDD REC_typeA_ARR 23 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01671 Gma-Chr6 16659869 16662360 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01671 16 163 Response Regulator Gene Family AT5G62920 75.000 2.22e-76 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gma06g01671 Response_reg 7.6e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01671 K14492 - gmx:100819165 384.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01671 06 16659869 16662360 Gma04g01722 04 46526741 46529591 ECH
Gma06g01671 06 16659869 16662360 Gma06g01671 06 16659869 16662360 ECH
Gma04g01722 04 46526741 46529591 Gma06g01671 06 16659869 16662360 GST